Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0921 ATGACCAGGAATATACCTAATCAAGCTATCGAACAAGAAGATGAAACAAAACCTTTGTGCAAATATGTTTCAAAGCTAAGAAAAACAACTGGTGGCGAAAATAATATGATCCAATGTAGTTTGTGTAATTTTATATTCAATTTATTAAAACTTACGGGAGCAGGAGTTAGAAGTTATCCGTATGTGACTGCGTCAAAACTTGTTGAGTTAAGAAAATTAGACAATGAAGCAAAATTGAAAATAGAGGGAAATCAGACTAGGAGTGATGTTAACCCAAAATTCAAAGGTTCTTTACAAGTTGCTTTCAATATTCAAGCGAGAGATACTCTTGATTGTGAAATTGCAAGAATGTTTTATTCTTCAGGACTACCGTTTCATTTAGCAAGAAGTCCTTATTATAGAAGTGCATTTTCTAATGCAGCCAATACTTCTAATCTTAGTGGATATGTACCGCCAACATATAATAAATTGAGAGGTCCTTTACTTTCAAAGGAAAGAAGTCATGTAGAAAATCTTTTGCAACCTATACAAAACTCGTGGAATCAGAAAGATGTAACAATTGTTAGTGATGGGTGGAGTGATCCTCAAAGAAGACCATTCATAAATTTCATGGCTATCACTGAGAGTGGACCAATGTTTTTAAAGTCAATAGATTGGTCTGGTGAGATAAAGGACAAAGAATTTATCGCTAAACACATGAGAGATGTAATTATGGAGGTTGGACACAACAATGTGGTACAAATAATAATTGATAATGCAGTTGTATGTAAGGCAGCGGATATGCTCATAGAATCTGAATTTTCTTCAATCTATTGGACTCCTTGTGTATATTTGTGCAGAAAAAATACTGATAAAAATAGTGATATTTATCATCAATGTTCTTGGATCTCACAAATTGTTGATGATGTTACCTTTGTTAAAAACTTTATTATGGGACACTCTATGAGATTATCAATGTTCAATAATTTTAACTCATTGAAGTTGCTCTCTGTTGCTCCAACAAGATTTGCTTCAACCATAGTCATGTTAAAAAGTGATGAATGGTCTTTTTACAAAAAGGATAATGTGGATAGTGCACAATTTGTGAAAGAAACTTTGTTGACTGATAATTGGTGGATGAAGGTTGATTATATACTTGCTTTTACTGCCCCTATTTATGATGTTCTTAGAAAAACAGATACGGATATGGCATCTCTTCACTTGGTATATGGAATATGGGATTCAATGATTGAAAATGTGAAAAGAGTCATAGACCAACATGAAAGGAAGACAGAAGTTGAATATTCATCATTTTTCAAGGTAGTGGAGTTAATATTAATTGATCGTTGGACTAAAAGTAGCACACCTCTTCATTGTCTAGCTCATTCTTTAAATCCAAGTCGTGAATGGTTAGATGAAGATTCAAAAAGACTTGCCCCACATCAAGATCACGAAATTACTCAGGAAAGAAAAAAATGTTTTATGAGATACTTTGATGATGCAGACATAAGGACACAGGTAAATATAGAGTTTGCAAACTTTTCAGGTGGAAGAGAAGATTTTGATGATGCTGACTCTTTAAGGGATAGAATAATCTTCGCCTTCTATCAAGAAATTCCTCAAAATACAAAGAAGAGGAAACTAAATTGTGGGATATTGCAGGAGATGATTTTTCATTGGATGAAAATGGAATTCTTGAGATTGCTAATTTATCTCTTGATGGACCATAATTAG 1713 0.3322 MTRNIPNQAIEQEDETKPLCKYVSKLRKTTGGENNMIQCSLCNFIFNLLKLTGAGVRSYPYVTASKLVELRKLDNEAKLKIEGNQTRSDVNPKFKGSLQVAFNIQARDTLDCEIARMFYSSGLPFHLARSPYYRSAFSNAANTSNLSGYVPPTYNKLRGPLLSKERSHVENLLQPIQNSWNQKDVTIVSDGWSDPQRRPFINFMAITESGPMFLKSIDWSGEIKDKEFIAKHMRDVIMEVGHNNVVQIIIDNAVVCKAADMLIESEFSSIYWTPCVYLCRKNTDKNSDIYHQCSWISQIVDDVTFVKNFIMGHSMRLSMFNNFNSLKLLSVAPTRFASTIVMLKSDEWSFYKKDNVDSAQFVKETLLTDNWWMKVDYILAFTAPIYDVLRKTDTDMASLHLVYGIWDSMIENVKRVIDQHERKTEVEYSSFFKVVELILIDRWTKSSTPLHCLAHSLNPSREWLDEDSKRLAPHQDHEITQERKKCFMRYFDDADIRTQVNIEFANFSGGREDFDDADSLRDRIIFAFYQEIPQNTKKRKLNCGILQEMIFHWMKMEFLRLLIYLLMDHN* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0921 570 Pfam Protein of unknown function (DUF 659) 152 303 IPR007021 -
Pvu11g0921 570 SUPERFAMILY Ribonuclease H-like 182 492 IPR012337 -
Pvu11g0921 570 PANTHER HAT TRANSPOSON SUPERFAMILY PROTEIN 29 524 - -
Pvu11g0921 570 PANTHER OSJNBA0013A04.12 PROTEIN 29 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0921 Pvu-Chr11 8816914 8820662 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0921 - - pvu:PHAVU_011G130000g 743.036