Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0920 TCTTGGATGCACTGTGGATACCATTTGACAACATCGATTTTGGCACCAACTCTTCTGAATGAAAAATCTGAGAACCCAAATGGTGTTCAAGAGCTTCACCACCAAAATGATGTTGATGCAGGAGCTCTCTTTGTCCTCAAGTCTGAAGGTTCTTGGATGCATTGTGGATACCATTTGACAACATCGATTGTGGCACCACCTCTTTTGAGTCTTCCTTATGCATTTACCTTCCTTGGATGGACGGCTGGGATCTTAAGCTTGGTGATTGGAGCATTGGTGACCTTCTATTCATATAATTTAATATCTAGGGTTCTTGAACACTACGCCCAAAATGGTAAACGTCAGCTACGTTTCAGAGACATGGCTCGTGATATTTTAGGTCCAAGATGGGGTCGTTATTTTGTTGGTCCAATTCAGTTCGCAGTTTGTTTTGGTGCTGTAGTGGCTTGCACTCTTTTAGGAGGACAATGCATGAAGGCAATTTACTTGTTGTCAAATCCAAACGGGACCATGAAGCTTTACGAGTTTGTAATCATATTTGGATGCTTCATGCTAATTTTGGCTCAGCTTCCAGCTTTCCACTCATTGAGGCACATTAATCTAGTGTCATTGATTCTCTGCTTGGCATATAGTGGTTGTGCTACTCTTGGTTCCACTTACATTGGAGAGTCATCCAAAGGACCAGAAAAAGACTACTCTTTGAAAGGTGATACTAAGAATCGCTTATTTGGAATCTTCAATGCAATTGTCATCATTGCCACGACTTATGGAAATGGAATCATTCCAGAAATTCAGGCAACACTAACACCACCAGTAAAAGGGAAGATGTTCAAGGCACTATGTGTTTGTTATTTTGCACTTATTGTCACTTTTTTTAGTGTATCTGTATCTGGTTATTGGGCATTTGGCAACAAATCTGAAGGCCTCATATTAAGCAATTTTGTGGACAATGGGAACCCTCTGGTGCCCACATGGTTCATTTACATGACCAACATTTTCACTATAACACAATTATCAGCCGTTGGTGTGGTTTATTTGCAACCAACAAATGAAGTGTTGGAGCAAACATTTGGAGATCCAAAAAGCCCTGAGTTTTCCAAACGCAATGTAATCCCTAGAGTGATTTCTCGATCACTAGCTATTACTCTTTCAACCATTATAGCAGCCATGCTTCCATTTTTTGGAGACATAAATTCTCTTATTGGAGCTTTTGGCTTTATCCCTCTTGATTTCATTCTGCCAGTGATTTTCTACAATTTCACATTTAAGCCATCTAAGCGAAGCTCTATTTACTGGTTGAATGTAACTATTGTTGTGGCTTTCTCTGCATTGGGAGCAATAGCAGCAGTTGCAGCAGTTAGACAAATAGTTCTTGATGCCAAAAGTTATAGATTATTTGCTAATGTATGA 1410 0.3979 SWMHCGYHLTTSILAPTLLNEKSENPNGVQELHHQNDVDAGALFVLKSEGSWMHCGYHLTTSIVAPPLLSLPYAFTFLGWTAGILSLVIGALVTFYSYNLISRVLEHYAQNGKRQLRFRDMARDILGPRWGRYFVGPIQFAVCFGAVVACTLLGGQCMKAIYLLSNPNGTMKLYEFVIIFGCFMLILAQLPAFHSLRHINLVSLILCLAYSGCATLGSTYIGESSKGPEKDYSLKGDTKNRLFGIFNAIVIIATTYGNGIIPEIQATLTPPVKGKMFKALCVCYFALIVTFFSVSVSGYWAFGNKSEGLILSNFVDNGNPLVPTWFIYMTNIFTITQLSAVGVVYLQPTNEVLEQTFGDPKSPEFSKRNVIPRVISRSLAITLSTIIAAMLPFFGDINSLIGAFGFIPLDFILPVIFYNFTFKPSKRSSIYWLNVTIVVAFSALGAIAAVAAVRQIVLDAKSYRLFANV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0920 469 Pfam Transmembrane amino acid transporter protein 50 453 IPR013057 -
Pvu11g0920 469 PANTHER OS05G0424000 PROTEIN-RELATED 38 464 - -
Pvu11g0920 469 PANTHER GABA TRANSPORTER 1 38 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0920 Pvu-Chr11 8799141 8802929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0920 141 469 Organic Solute Cotransporters AT1G08230 64.048 8.50e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0920 - - gmx:100791114 808.905