Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0907 ATGGAAGTGGTGGCCGCCGTTTTTCTGTTCGCCGCCGCTCTTCTGTCGGTGGGGGAGGGGTCGCCGGTGACTCTGACGCTGGAAAGAGCATTTCCTTCGAATCATGGCGTGGAGTTGAATCAGCTCAGAGCGAGGGACAGCCTCAGACATCGTAGAATGTTGCAGTCTACTAACTATGTTGTAGATTTCCCTGTCAAAGGCACCTTCGATCCCTCACAAGTCGGGCTTTACTATACCAAGGTAAAAATGGGTACTCCTCCAAGGGAATTTTATGTGCAGATTGACACTGGGAGTGATGTTCTCTGGGTTAGTTGTGGGTCCTGCAATGGTTGTCCTCAGACAAGTGGGCTGCAAATTCAGCTCAATTACTTTGACCCTAGGAGTTCATCAACATCTTCATTGATCTCTTGTTCAGACCGGAGGTGCAAGAACGGAGTACAGTCCTCCGATGCAAGCTGTTCCGGTCAGAACAACCAGTGCACTTATACGTTCCAGTACGGAGATGGCAGTGGGACATCAGGCTATTATGTGTCAGACTTGATGCATTTTGCTAGTATTTTTGAGGGATCCTTGACAACAAATTCTTCGGCATCTGTAGTTTTTGGTTGTAGCATCCAGCAGACTGGGGACTTAACAAAGTCTGATAGAGCAGTTGATGGGATATTTGGATTTGGGCAACAAGGCATGTCTGTCATTTCCCAACTCTCATCGCAAGGAATTGCACCAAGAGTGTTCTCTCATTGCTTAAAAGGAGATAATAGTGGTGGGGGTGTCTTGGTTCTTGGTGAAATTGTGGAGCCAAACATAGTTTATACTCCACTTGTTCCATCACAGCCTCATTACAATTTATATCTGCAGAGCATCTCTGTCAATGGCCAGCCTTTGCAAATTGACCCTGCAGTTTTTGCTACATCAAACAACAGAGGTACCATTGTTGATTCTGGAACAACTTTGTCCTACCTTGCAGAAGAGGCTTATACAACCTTTGTGAATGCGATTACAGCAGCTATTCCACAATCTGTACGTAGTGTTCTTTCTAGGGGAAATCAGTGTTACTTAATAACCAGCTCCAGCAATGTTGACATTTTTCCACAAGTAAGTCTGAACTTCGCTGGTGGTGCATCTCTGGTTTTAAGACCACTGGACTACCTTATTCAACAGAATTATATTGGTGAGGGTTCAGTTTGGTGTATTGGCTTTCAGAAAATCCCGGGTGAAAGTGTAACTATTCTAGGAGATCTCGTATTAAAAGACAAAATTTTTGTCTATGATCTTGCTGGTCAACGCATTGGATGGGTTAATTATGACTGTTCACTGCCTGTGAATGTATCTGCATCAACTGGTAGGGGCAGAAGTGAGTTTGTAGATGCAGGAGAGCTAGGTGGAAGCACTTCTTTATGTGATGGACCTCACACTTTGATAAGGACATTGTTCCTTGCTCTGTTCATGCATATAACACTATTTTTGTAG 1470 0.4442 MEVVAAVFLFAAALLSVGEGSPVTLTLERAFPSNHGVELNQLRARDSLRHRRMLQSTNYVVDFPVKGTFDPSQVGLYYTKVKMGTPPREFYVQIDTGSDVLWVSCGSCNGCPQTSGLQIQLNYFDPRSSSTSSLISCSDRRCKNGVQSSDASCSGQNNQCTYTFQYGDGSGTSGYYVSDLMHFASIFEGSLTTNSSASVVFGCSIQQTGDLTKSDRAVDGIFGFGQQGMSVISQLSSQGIAPRVFSHCLKGDNSGGGVLVLGEIVEPNIVYTPLVPSQPHYNLYLQSISVNGQPLQIDPAVFATSNNRGTIVDSGTTLSYLAEEAYTTFVNAITAAIPQSVRSVLSRGNQCYLITSSSNVDIFPQVSLNFAGGASLVLRPLDYLIQQNYIGEGSVWCIGFQKIPGESVTILGDLVLKDKIFVYDLAGQRIGWVNYDCSLPVNVSASTGRGRSEFVDAGELGGSTSLCDGPHTLIRTLFLALFMHITLFL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0907 489 Pfam Xylanase inhibitor N-terminal 77 262 IPR032861 -
Pvu11g0907 489 Gene3D Acid Proteases 51 263 IPR021109 -
Pvu11g0907 489 CDD pepsin_A_like_plant 77 437 IPR034161 -
Pvu11g0907 489 Pfam Xylanase inhibitor C-terminal 280 432 IPR032799 -
Pvu11g0907 489 PANTHER ASPARTYL PROTEASES 5 454 IPR001461 GO:0004190|GO:0006508
Pvu11g0907 489 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 454 - -
Pvu11g0907 489 PRINTS Pepsin (A1) aspartic protease family signature 83 103 IPR001461 GO:0004190|GO:0006508
Pvu11g0907 489 PRINTS Pepsin (A1) aspartic protease family signature 310 321 IPR001461 GO:0004190|GO:0006508
Pvu11g0907 489 PRINTS Pepsin (A1) aspartic protease family signature 409 424 IPR001461 GO:0004190|GO:0006508
Pvu11g0907 489 Gene3D Acid Proteases 264 442 IPR021109 -
Pvu11g0907 489 ProSiteProfiles Peptidase family A1 domain profile. 77 433 IPR033121 -
Pvu11g0907 489 SUPERFAMILY Acid proteases 74 439 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0907 Pvu-Chr11 8589045 8593797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0907 51 438 Miscellaneous Gene Families AT1G44130 26.914 4.76e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0907 - K00924 gmx:100811632 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1332 5 35363588 35368011 Pvu11g0907 11 8589045 8593797 PCT