Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0901 ATGTCTATGTTAGGTTCCCCATTCCAGCTTCTGGAAGTCAACATTATATCTGCACAAGACCTTGCACCTGTTTCCAAATCCATCAAAGCCTATGCAGTTGCATGGCTTGACCCTGAACGCAAACTCACAACCCAAATACACCCTGATGGCCACAACAACCCCACATGGAATGAGAAATTCGTGTTTCGTATCGATGAAGACTTCCTCTATGCTGACGACTCCGTTGTCATGATCGAAATCTACGCCTCCACATGGCTACGCGACATTCTCGTCGGCACCGTTGGTGTTCTACTCTCCAACCTCTTGCCACGTTCCATTAATCGTACATCCAAGATTCGCTTCATCGCATTGCAAGTTCGTCGCCCCTCGGGTCATCCCCAAGGGATTCTCAACATTGGAGTCAACCTCGTTGACCCCACGCGGAGGAGCATGCCGATGTATTCAGAGCTCGGATCCTCCACCGTTGGGGATTGGGACGCTGACCCTAAGAAACAGAAACCAATGCCGAACCAAACGCCGTCGAACGAATTTAACAGTGCCAAGTGCAAGCTCTTAACGCTACAGCGCTCCGCGAGCGAGAAGAACGACTCCACCATAAACGACTACACGTACAAAAATTATCCGAAGGGTTACGAAGATAACGAAGATTGTCAAGGTTCTGAGCTTGGGATGCCGACAACGAAGAAAGGGATGATTATGAACTTGAATGGGTCGTTGTGTTCAGATGTGGGGCCCTCACCATCAGTTGTGGCGACGGCAATAGCTAAGGGGTTGTACCCGTTTCCGATGATGGCACCGCAGAAGACAGGGAACTTGGTTTTTGAAGGGTGGCCGGGGAAGGAGAAGGGGCCGGAAGAACTGAATACGAAGATTGATCAGTGGCGATCGATGGAGCGTGGTGGGGTGGCGGTTTATGATCATCTAGGACAGAATGAGAAGACAGGGAAGCATAATGTTCCAAAGGGGAAAGGGCAGAACCAACGACGGAGTGGTGCGAATGGAGGGCTATTTTCGTGTTTTGGGACAGCAATGGGGTGTGAGTTTTCGATAACTTGTGGTGGGGGTAATAGAAGTCGAAAGAAGAGGTACAAGGGTGGTGGTAGAAAGGCGCATGTTACTCTAGCCTCTGAACTCACCTATGATGAATCTTATATTTGA 1158 0.4965 MSMLGSPFQLLEVNIISAQDLAPVSKSIKAYAVAWLDPERKLTTQIHPDGHNNPTWNEKFVFRIDEDFLYADDSVVMIEIYASTWLRDILVGTVGVLLSNLLPRSINRTSKIRFIALQVRRPSGHPQGILNIGVNLVDPTRRSMPMYSELGSSTVGDWDADPKKQKPMPNQTPSNEFNSAKCKLLTLQRSASEKNDSTINDYTYKNYPKGYEDNEDCQGSELGMPTTKKGMIMNLNGSLCSDVGPSPSVVATAIAKGLYPFPMMAPQKTGNLVFEGWPGKEKGPEELNTKIDQWRSMERGGVAVYDHLGQNEKTGKHNVPKGKGQNQRRSGANGGLFSCFGTAMGCEFSITCGGGNRSRKKRYKGGGRKAHVTLASELTYDESYI* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0901 385 MobiDBLite consensus disorder prediction 310 330 - -
Pvu11g0901 385 Gene3D C2 domain 8 154 IPR035892 -
Pvu11g0901 385 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Pvu11g0901 385 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 355 - -
Pvu11g0901 385 CDD C2_SRC2_like 11 132 IPR044750 GO:0006952
Pvu11g0901 385 PANTHER INGRESSION PROTEIN FIC1 1 355 - -
Pvu11g0901 385 Pfam C2 domain 10 104 IPR000008 -
Pvu11g0901 385 SMART C2_3c 10 110 IPR000008 -
Pvu11g0901 385 MobiDBLite consensus disorder prediction 154 177 - -
Pvu11g0901 385 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 148 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0901 Pvu-Chr11 8476104 8477261 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0901 - - gmx:100795448 512.686