Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0899 ATGGCTCCAAAACGTGCTCAGAAGTTGGTGGTGAGATCCACCAAGAAAGTTGTGGAATCAAGTGTGCAAGTATCTGTTGTAAGCAGCAGCAGCAGGAAAAGACAAACCCGGGGAAACAAAGACAATATTCAAACAGAAGAAGCAGTAGGTGAAGAAAAGCATGTGATGGTCATTCCCATTCAAGAAGGGAATCCTCAAGCCCAAAAGGATTCCTCTACCTCTGCCATGACTAATGAAAACAAGGGTGAGCAAGAGAACAGTGTTCAAGATGATGGAGTTCAAAATGAAGAGAAAAAGAAGAAGGGAGAGAATGAGGAAGTTAAGGAGGAGAAGAAGGGCAGGTTCCCAAAAGGGTCTAATGGTAAAGAGAAAAAGTTGGGGAAAAAGAAGGGGAGGAGAAGTGCAGAAGGGTATCAGAGGTATGTGTATAGGGTGTTGAAGCAGGTGCACCCTGAAATGGGAATCTCTTCCAAATGCATGACTATTCTGAACAACTTGATGAATGACATGTTTGAGAGGCTGGCTGGTGAGGCTTCTAAGCTGAAGGACTACACTGGACACATGACATTGTCTTCAAGGGAGATTCAAGGAGCAGTGAAGCTGGTTTTGCCAGGAGAGCTTGGGAAGCATGCCATTGCTGAAGGTGTCAAAGCTGTGAATAACTTCACCTCCTATGATGCCTGA 684 0.4488 MAPKRAQKLVVRSTKKVVESSVQVSVVSSSSRKRQTRGNKDNIQTEEAVGEEKHVMVIPIQEGNPQAQKDSSTSAMTNENKGEQENSVQDDGVQNEEKKKKGENEEVKEEKKGRFPKGSNGKEKKLGKKKGRRSAEGYQRYVYRVLKQVHPEMGISSKCMTILNNLMNDMFERLAGEASKLKDYTGHMTLSSREIQGAVKLVLPGELGKHAIAEGVKAVNNFTSYDA* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0899 227 Coils Coil 93 113 - -
Pvu11g0899 227 Gene3D Histone, subunit A 63 225 IPR009072 GO:0046982
Pvu11g0899 227 MobiDBLite consensus disorder prediction 1 133 - -
Pvu11g0899 227 MobiDBLite consensus disorder prediction 91 122 - -
Pvu11g0899 227 PANTHER HISTONE H2B.2 1 226 - -
Pvu11g0899 227 SMART h2b3 128 224 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0899 227 PANTHER HISTONE H2B 1 226 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0899 227 Pfam Core histone H2A/H2B/H3/H4 88 201 IPR007125 GO:0003677
Pvu11g0899 227 SUPERFAMILY Histone-fold 110 224 IPR009072 GO:0046982
Pvu11g0899 227 MobiDBLite consensus disorder prediction 14 33 - -
Pvu11g0899 227 MobiDBLite consensus disorder prediction 64 89 - -
Pvu11g0899 227 PRINTS Histone H2B signature 138 156 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0899 227 PRINTS Histone H2B signature 157 177 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0899 227 PRINTS Histone H2B signature 179 196 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0899 227 PRINTS Histone H2B signature 196 209 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0899 227 PRINTS Histone H2B signature 209 222 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0899 227 MobiDBLite consensus disorder prediction 34 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0899 Pvu-Chr11 8463106 8464089 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0899 K11252 - gmx:100786873 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0899 11 8463106 8464089 Pvu11g0899 11 8463106 8464089 ECH