Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0891 ATGGCACTCTCACACTCCATCTCTGCGTTATCAACCACACTCACGTTTTTCTCCCCAATAAGCAAACCCATCACCAACAAAGTGAATTCCTTTCCCTTCTTCTCGAACAAGGGTACGCAATTTTTCACGAAACAAACTCGACCCAGAAGCGGAACAAGCCTTCTGCTTACTCCTGCACGCGTTGCCGCGCCACCCTCAACGGTTGAAACCGATCAATCGTTCCCTGAAACCGAAAGGGGGGAGACCGAGGAAGAGTTTAACGAGGAGAGCTCTTCCTCTAAGTTCTCCTGGAGGGATCACTGGTACCCTGTTTCGTTAATTGAGGATCTGAACCCTCTCTTGCCCACACCGTTTCAGCTTCTGGGTCGTGAAATCGTGCTCTGGTACGACAAGGCCATTTCCCAATGGGTGGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTATCTGAAGGAAGGATTGATGAAGATGGAAAGTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGTTGTGGATCTTGTGTTAAGATTCCTCAGGCTGCATCTGAAGGCCCAGAAGCACGTGCTATTCGATCTCCTAAAGCGTGTGCCACTAGGTTCCCTACTCTAGTGTCTCAGGGCTTACTCTTTGTTTGGCCTGATGAAAATGGTTGGGAGAAAGCAAGTGCCTCCAAGCCTCCAAT 689 0.492 MALSHSISALSTTLTFFSPISKPITNKVNSFPFFSNKGTQFFTKQTRPRSGTSLLLTPARVAAPPSTVETDQSFPETERGETEEEFNEESSSSKFSWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKAISQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAIRSPKACATRFPTLVSQGLLFVWPDENGWEKASASKPP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0891 229 Gene3D - 96 229 IPR036922 GO:0051537
Pvu11g0891 229 SUPERFAMILY ISP domain 94 219 IPR036922 GO:0051537
Pvu11g0891 229 Pfam Rieske [2Fe-2S] domain 100 183 IPR017941 GO:0051537
Pvu11g0891 229 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 39 229 - -
Pvu11g0891 229 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 101 213 IPR017941 GO:0051537
Pvu11g0891 229 MobiDBLite consensus disorder prediction 74 91 - -
Pvu11g0891 229 MobiDBLite consensus disorder prediction 61 91 - -
Pvu11g0891 229 CDD Rieske_RO_Alpha_PaO 94 224 - -
Pvu11g0891 229 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 39 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0891 Pvu-Chr11 8374397 8375718 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0891 K13071 - pvu:PHAVU_011G0867000 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0891 11 8374397 8375718 Pvu11g0891 11 8374397 8375718 ECH