Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0888 ATGGCGTCACCGTTATCTTCTCTCTCCTCCACCTCTTCTTCACTCTTTCACCACACCTTCACCGGAGGCTCGAAGGTTCCAATTCCCTTCCCCAACAAAACTGCGCACTTTTTTGTCTTCGCTCAAAAGAAGGCAAAGAAAACTCGAAAGATTATTCTGAAGGAAGATGTGGCTGATGTGGGAAAGCAAGGGCAACTTCTTGATGTGAAGGCTGGTTTTTACAGAAATTTCCTGCTTCCTTTGGGAAAGGCACAACTTGTTACACCCCAGCTACTCAAGGAAATGAAGATAGAAGAAGAAAGAATTGAGGCTGAGAAAAGACGGGTAAAAGAAGAGGCAGAGCAACTTGCTCTAATTTTTGAAACTGTTGGGCCTTTCAAGGTGAAGCGTAAAGGTGGTAAAGGAAAACAAATTTTTGGAAGTGTCACTGCTCAAGATCTTGTTGACATAATCAAGGCACAGCTTCAAAGGGAGCTGGACAAGAGAATTGTTGATCTTCCAGAGATCAGGGAAACAGGAGAATATATTGCAGAGTTAAAGCTTCACCCTGAAGTTACAGCTAGAGTGAAGTTGAATGTTTCTGCCAACTAA 591 0.4298 MASPLSSLSSTSSSLFHHTFTGGSKVPIPFPNKTAHFFVFAQKKAKKTRKIILKEDVADVGKQGQLLDVKAGFYRNFLLPLGKAQLVTPQLLKEMKIEEERIEAEKRRVKEEAEQLALIFETVGPFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRELDKRIVDLPEIRETGEYIAELKLHPEVTARVKLNVSAN* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0888 196 Pfam Ribosomal protein L9, C-terminal domain 111 194 IPR020069 -
Pvu11g0888 196 SUPERFAMILY Ribosomal protein L9 C-domain 105 195 IPR036791 -
Pvu11g0888 196 Coils Coil 92 119 - -
Pvu11g0888 196 Pfam Ribosomal protein L9, N-terminal domain 50 95 IPR020070 -
Pvu11g0888 196 SUPERFAMILY L9 N-domain-like 50 105 IPR009027 -
Pvu11g0888 196 Gene3D - 50 108 IPR036935 -
Pvu11g0888 196 TIGRFAM L9: ribosomal protein bL9 50 195 IPR020594 GO:0003735|GO:0005840|GO:0006412
Pvu11g0888 196 ProSitePatterns Ribosomal protein L9 signature. 61 88 IPR020070 -
Pvu11g0888 196 Gene3D - 109 196 IPR036791 -
Pvu11g0888 196 Hamap 50S ribosomal protein L9 [rplI]. 49 196 IPR020594 GO:0003735|GO:0005840|GO:0006412
Pvu11g0888 196 PANTHER 50S RIBOSOMAL PROTEIN L9 1 196 IPR000244 GO:0003735|GO:0005840|GO:0006412
Pvu11g0888 196 PANTHER 50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC 1 196 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0888 K02939 - gmx:100500390 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0888 11 8351501 8354712 Pvu11g0888 11 8351501 8354712 ECH