Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0880 ATGTGGACACCAAATTCTTATTATTTGGGTGTCGAGGGAATTGGAGAGATAAAGATCCAAAAAAGAATCGATCTGATTCAAGTCATAATATATATGGGATTTCCCAAGTTATTAATAGAAGGTAAGCCGCATAAAATCGAAGAATTCCAGACGAATATGCACAAAAAACTGAATTGTGTGAATAAAAAACTAAACATTGCTATTGTAAAAATAACAAATGCTTATAAACACCCTAATATTCTTGCAGAATTTATAGCTGGACAATTAAAGAATAGAGTTTCATTTCGTAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAAGCAGGTACAAAAGGAGTTCAAGTACAGATTGCAGGGCGTATTGATGGCAAAGAAATTGCGCGTGTAGAATGGATAAGAGAAGGTAGGGTTCCTTTACAAACCATTCGAGCTAAAATTGAATATTGTTGTTATACAGTTCGAACTATTTATGGGATTTTAGGGATAAAAGTTTGGATATTTTCTAAATAA 513 0.3216 MWTPNSYYLGVEGIGEIKIQKRIDLIQVIIYMGFPKLLIEGKPHKIEEFQTNMHKKLNCVNKKLNIAIVKITNAYKHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIEYCCYTVRTIYGILGIKVWIFSK* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0880 170 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 11 80 IPR009019 GO:0003723
Pvu11g0880 170 PANTHER 30S RIBOSOMAL PROTEIN S3, CHLOROPLASTIC 10 169 - -
Pvu11g0880 170 ProSitePatterns Ribosomal protein S3 signature. 128 162 IPR018280 -
Pvu11g0880 170 Gene3D - 6 72 IPR015946 -
Pvu11g0880 170 Gene3D - 74 170 IPR036419 -
Pvu11g0880 170 SUPERFAMILY Ribosomal protein S3 C-terminal domain 73 169 IPR036419 -
Pvu11g0880 170 TIGRFAM rpsC_bact: ribosomal protein uS3 11 169 IPR005704 GO:0003735|GO:0006412
Pvu11g0880 170 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 10 169 - -
Pvu11g0880 170 Pfam Ribosomal protein S3, C-terminal domain 85 167 IPR001351 GO:0003735|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0880 K02982 - gmx:3989335 303.908