Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0877 ATGGCAGTAGCTGTAACTGTCGTTGGTGCAGCAGCTACTCTTCTTGTAAAGAGATCCAAAACTTCTGAGTCAGTACAGATGATCTGGTGGAGGAATGAAAAAGGAGCTTTTGGTGGTATGCACAGCAGTGTAGATAGCTCTTCATTGGTTCAAAACAATAGTAGGAAAAGAATGTTTCCTCAATCTGATGGGGTTTTTCATGATACCAAAGATGATGGTTATATGCCAAAACAGACTTCTTTGTGTGTTTTGATGCTATATTACACAGAGAATGGTCTATTTCCTCAAGCACAGACTACATGGGAGCAGCTCCTATATAGTTCTTTTGTACCTTCTGTTGAATTTATTTCAAGATTATTTGATGCTTATGCAAAACATGGAAAATTCGATGAAGTGGTCAACATTCTACGTTACGTGGATATGAGGAATTTCAGTATATTACCTAATGTTTACTCGTTGGCTATCTCTTGTTTTGGAAGAGAAGGACAGCTTGAGTTAATGGAAGATATGGCAAAGGAAATGGCTTCAAGAGGTGTCCATATCTCTTCTAAAACTGCAAATGCTTTTGTTTTGTATTATAGCATTTTTGGTTCTTTGAAAGACATGGAGAATGCGTATGGCCGCCTTAAGAAATCGAGATTTCTGATAGAGAGGGAAGTGATTCGGGCCATGGCCTCCGCATATACAAGGGAGAGACAATTCTATGAATTGGGTGAGTTCCTTAGAGATGTTGGTCTAGTTAGAAAAGATGTGGGAAATCTTTTATGGAACCTTATGTTACTCTCTTATGCTGCCAATTTCAAGATGAAAAGCTTGCAGAAAGAGTTTCTCCAGATGGTGGAATCTGGATTCCGTCCTGATATTACGACCTTTAATATTCGTGCTTTAGCCTTCTCAAGGATGGCTTTGTTCTGGGATCTCCACCTTAGCATCGAACATATGGAACATGAGAATGTCATTCCTGATCTAGTGACTTTTGGGTGTGTAGTTGATGCATACTTGGACAGAGGGCTTGGAAAGAACTTGAACTTTGCTCTAAACAAAATGAACTTGGATGATTCTCCAATGTTGTTAACAGATCCGTTTGTGTATGAGGCCTTGGGTAAAGGGGACTTTCAAATGAGTTCTGAAGCATTTTTTGAGTTCAAGACACATAGGAAATGGACTTACCGTGCTTTGATACAAAAGTATCTCAAGAAACATTATAGAAGAAACCAGATATTTTGGAACTACTAA 1236 0.3875 MAVAVTVVGAAATLLVKRSKTSESVQMIWWRNEKGAFGGMHSSVDSSSLVQNNSRKRMFPQSDGVFHDTKDDGYMPKQTSLCVLMLYYTENGLFPQAQTTWEQLLYSSFVPSVEFISRLFDAYAKHGKFDEVVNILRYVDMRNFSILPNVYSLAISCFGREGQLELMEDMAKEMASRGVHISSKTANAFVLYYSIFGSLKDMENAYGRLKKSRFLIEREVIRAMASAYTRERQFYELGEFLRDVGLVRKDVGNLLWNLMLLSYAANFKMKSLQKEFLQMVESGFRPDITTFNIRALAFSRMALFWDLHLSIEHMEHENVIPDLVTFGCVVDAYLDRGLGKNLNFALNKMNLDDSPMLLTDPFVYEALGKGDFQMSSEAFFEFKTHRKWTYRALIQKYLKKHYRRNQIFWNY* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0877 411 Pfam PPR repeat 151 179 IPR002885 -
Pvu11g0877 411 Pfam PPR repeat 119 137 IPR002885 -
Pvu11g0877 411 PANTHER OS08G0520200 PROTEIN 20 411 - -
Pvu11g0877 411 PANTHER OS08G0520200 PROTEIN 20 411 - -
Pvu11g0877 411 Gene3D Tetratricopeptide repeat domain 46 250 IPR011990 GO:0005515
Pvu11g0877 411 Gene3D Tetratricopeptide repeat domain 251 401 IPR011990 GO:0005515
Pvu11g0877 411 TIGRFAM PPR: pentatricopeptide repeat domain 150 181 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0877 Pvu-Chr11 8235381 8240755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0877 7 400 Glycosyltransferase AT1G05670 19.012 3.96e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0877 - - gmx:100818684 667.537