Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0873 ATGGCATCATCACTATCCTTCTCCAAACTTTCTCTGTTGCTTTTGTTCGCATCATTTTCTTTCTCCTATGCAACTTCTCGCTTCTCTCATCACCCTGCATACCCAACACAAACATCAAAAGCAGAAAAACTCATAAGAAGCCTCAACCTATTCCCAAAGGAACCCTTCAACAGCATTGAAGGTGACCATGAAGGTTTTGTCCCTGGTAAGATCGTGGAGAAGAAGTTCTCGTTTCTTGGTGATTCTGGGCCATCTGTTGAAGACCTTGGTCACCATGCAGGCTACTATTCACTTCCTCATTCCAAAGCTGCAAGGATGTTCTACTTTTTATTTGAATCACGAAGCAGTAAGGATGATCCTGTTGTCGTATGGTTGACTGGAGGACCAGGGTGTGGAAGTGAATTAGCTTTGTTTTATGAAAATGGTCCTTTTCATATTACCAATAACTTGTCTCTTACATGGAATCAATACGGCTGGGATCAGGCATCAAATATTATATTTGTTGACCAACCTACAGGTACAGGTTTTAGTTACTCTTCTGATATCAATGACCTTCGCTCAGATGAAACCGGTGTTAGCATTGATTTATATGACTTCTTGCAGGAGTTTTTCAAGTCTCATCCTGAGTTGGTTAAGAATGACTTTTATATCACTGGAGAATCATACGCTGGACACTATATTCCTGCAATTGCATCACGGATCAACCAACAAAATAAAATGAAACATGGAATCCATATAAACCTCAAGGGTATTGCTATTGGTAATGGGTATACATATCCTGCAATTCAATACCTAGCATACCCACAATTTGCGTTAGAAAACGGACTAATTACCAAGAAAGAGGCAGATGATATCAGCAAGTTAATCCCACACTGTGAAGAAGCTGCTAAAATCTGCGAATCTCATGGTGGAGTAACTTGTGAGAATGCATATGATAGTTGTGAAGAAATCTTCGATAGAATATTGACCATTGATGCTGATATTAATTACTATGACATTAGAAAGAAATGCGTGGGAGCTTTGTGTTATGACTTCAGCAACGTGGAGAAGTTGTTAAACCAGGAGAACGTGAAGAGTGCTTTAGGTGTGGGGAAGGGCTTGAAGTTTGTTTCATGCAGTACAGCAGTGTATGATGTTTTGCGGCAAGACGCCATAAAAAATCTGGCAGTGGGGATTCCTGGTCTTCTCGAGGATGGGATCAAAGTGCTTGTGTATGCTGGGGAAAAGGATCTCATATGCAATTGGATTGGGAATTTAATGTGGGTTCATGCCATGAATTGGCCAGGCCAAAAGGCTTTTGCGGCATCTCCAACAGTGAAATTTGTAGTTGATGGAGCAGAAGCAGGGTCTCTAAACAGCTTCGGACCTCTCTCTTTCCTCAAGGTACATGACGCTGGGCACCTGGTACCTATGGATCAACCAAAAGTTGCACTACAGATGTTGAAAAGTTGGATGGGAGGGAAACTGATAAACGCACCAGCAGATGATTAG 1491 0.4152 MASSLSFSKLSLLLLFASFSFSYATSRFSHHPAYPTQTSKAEKLIRSLNLFPKEPFNSIEGDHEGFVPGKIVEKKFSFLGDSGPSVEDLGHHAGYYSLPHSKAARMFYFLFESRSSKDDPVVVWLTGGPGCGSELALFYENGPFHITNNLSLTWNQYGWDQASNIIFVDQPTGTGFSYSSDINDLRSDETGVSIDLYDFLQEFFKSHPELVKNDFYITGESYAGHYIPAIASRINQQNKMKHGIHINLKGIAIGNGYTYPAIQYLAYPQFALENGLITKKEADDISKLIPHCEEAAKICESHGGVTCENAYDSCEEIFDRILTIDADINYYDIRKKCVGALCYDFSNVEKLLNQENVKSALGVGKGLKFVSCSTAVYDVLRQDAIKNLAVGIPGLLEDGIKVLVYAGEKDLICNWIGNLMWVHAMNWPGQKAFAASPTVKFVVDGAEAGSLNSFGPLSFLKVHDAGHLVPMDQPKVALQMLKSWMGGKLINAPADD* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0873 496 Pfam Serine carboxypeptidase 88 486 IPR001563 GO:0004185|GO:0006508
Pvu11g0873 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 489 IPR001563 GO:0004185|GO:0006508
Pvu11g0873 496 ProSitePatterns Serine carboxypeptidases, serine active site. 217 224 IPR018202 GO:0004185
Pvu11g0873 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Pvu11g0873 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Pvu11g0873 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 203 228 IPR001563 GO:0004185|GO:0006508
Pvu11g0873 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Pvu11g0873 496 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 33 489 - -
Pvu11g0873 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 457 474 IPR033124 GO:0004185
Pvu11g0873 496 SUPERFAMILY alpha/beta-Hydrolases 89 489 IPR029058 -
Pvu11g0873 496 Gene3D alpha/beta hydrolase 71 493 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0873 Pvu-Chr11 8153929 8156295 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0873 K16298 - gmx:100798795 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0873 11 8153929 8156295 Pvu11g0873 11 8153929 8156295 ECH