Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0865 ATGGGCGCGAAAAAGAAGACAGGCGGCGGAAACGGAAACAAGGAGAACCAGGACGCCGCCACCACCGTCGTTTTGAAGCTCGACTTCCACTGCGACGGTTGCGCTTCCAAGATCATTCGACACCTTCGTTCTTTCCAAGGTGTGGAGACTGTGAAGGCGGAGGACGGCGTCGGGAAGGTGACAGTGACCGGGAAAGTGGACCCCGTGAAGTTGAGGGACAACCTGGCGGAGAAGATGAAGAAGAAGGTGGAAATCGTCTCTCCGCAGACTAAGAAGGAGAAGGAGAAGGAGAAGGAGGAGAATAAAGACACCAAAGCGAATAACAAAACGCAGGACAAGAAAAACAAGGACAAAGAGGTGGTGACTACCGCGGTTCTGAAGATGGCACTGCATTGCCAAGGTTGCTTGGACAGGATTGGCAAGACTGTGCTGAAAACCAAAGGAGTGCAAGAAATGGCTATAGACAAGGAAAAGGAAACGGTGACTGTGAAAGGGACAATGGATGTTAAGGCTCTGGTGGAGAATCTAACGGAGAAGCTGAAGAGGAAGGTTGAGGTGGTCCCTCCCAAGAAAGAGAAGGATGCTGACAAGGACAAGGAAGGATCAGGGAACAAGAAGAAAAAGGGCGGTGGTGGAGGAGGAGGAGGAGGAGATACTAATGAAGAGGGAGTAGAGAAAATAGATTACAGCAGAATGGAGTATGTGCCACAACCTTCTTTTGGCTTTGGTTATGGTTATGGACACGGCAATATTGGTGGCTATAGCTATGTGCCAGTGTACCCGGAGCAGATGCAATTTCACTTACATGCACCAGCACCACAAATTTTTAGTGACGAGAACCCAAATGCTTGTTCTGTCATGTGA 864 0.4954 MGAKKKTGGGNGNKENQDAATTVVLKLDFHCDGCASKIIRHLRSFQGVETVKAEDGVGKVTVTGKVDPVKLRDNLAEKMKKKVEIVSPQTKKEKEKEKEENKDTKANNKTQDKKNKDKEVVTTAVLKMALHCQGCLDRIGKTVLKTKGVQEMAIDKEKETVTVKGTMDVKALVENLTEKLKRKVEVVPPKKEKDADKDKEGSGNKKKKGGGGGGGGGDTNEEGVEKIDYSRMEYVPQPSFGFGYGYGHGNIGGYSYVPVYPEQMQFHLHAPAPQIFSDENPNACSVM* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0865 287 SUPERFAMILY HMA, heavy metal-associated domain 121 184 IPR036163 GO:0046872
Pvu11g0865 287 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 5 287 IPR044594 GO:0046872
Pvu11g0865 287 Pfam Heavy-metal-associated domain 129 184 IPR006121 GO:0046872
Pvu11g0865 287 Pfam Heavy-metal-associated domain 29 82 IPR006121 GO:0046872
Pvu11g0865 287 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 5 287 - -
Pvu11g0865 287 CDD HMA 30 84 IPR006121 GO:0046872
Pvu11g0865 287 Coils Coil 94 114 - -
Pvu11g0865 287 SUPERFAMILY HMA, heavy metal-associated domain 21 85 IPR036163 GO:0046872
Pvu11g0865 287 MobiDBLite consensus disorder prediction 184 206 - -
Pvu11g0865 287 MobiDBLite consensus disorder prediction 83 116 - -
Pvu11g0865 287 MobiDBLite consensus disorder prediction 184 222 - -
Pvu11g0865 287 Gene3D - 118 194 - -
Pvu11g0865 287 Gene3D - 18 94 - -
Pvu11g0865 287 CDD HMA 130 185 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0865 Pvu-Chr11 8039669 8042648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0865 - - pvu:PHAVU_011G084200g 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0865 11 8039669 8042648 Pvu11g0865 11 8039669 8042648 ECH
Pvu5g1358 5 35722282 35724501 Pvu11g0865 11 8039669 8042648 PCT