Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0857 ATGAACAATTCTCACTCAGATAATCATGATGAAGCAACTGTGGTGGGATTTGAAGTTCCAAAATCACCTGATTCCAGTTACAACAATATCCACCCTGGAAATGAAGATGAGGCAAGGGATCCGCCTATGGTGCCTTCACATTTGCAACACACTTTGCTTAATTATCCTGCTAGTAGAGACACTGCAGGAACTGTTCCATTGCCTCAGAATGTGATTCTAAATCATCTTTACATCGAGAATAGAGAGTCCCCAAGATCTGTGGTGGCGTTGGGATTCACCCATCGTTTCCGCTCTAAATATGTTACAGTCGTGCTTTACAAACCAGTCCAAAGAAGGGGAAATACAGGTATTTAA 354 0.4209 MNNSHSDNHDEATVVGFEVPKSPDSSYNNIHPGNEDEARDPPMVPSHLQHTLLNYPASRDTAGTVPLPQNVILNHLYIENRESPRSVVALGFTHRFRSKYVTVVLYKPVQRRGNTGI* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0857 117 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 38 108 IPR006828 GO:0005515
Pvu11g0857 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 115 IPR043554 -
Pvu11g0857 117 MobiDBLite consensus disorder prediction 1 47 - -
Pvu11g0857 117 Gene3D - 13 109 - -
Pvu11g0857 117 SMART AMPKBI_2 20 109 IPR006828 GO:0005515
Pvu11g0857 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-3 1 115 IPR030067 GO:0009744|GO:0043562
Pvu11g0857 117 SUPERFAMILY AMPKBI-like 12 109 IPR037256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0857 Pvu-Chr11 7972675 7975507 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0857 - - gmx:102661902 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0857 11 7972675 7975507 Pvu11g0857 11 7972675 7975507 ECH