Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0846 ATGATGTCCCACTCCCACCAGCATCCACAACCTCAACAAAGACGGTTATTATCTCTGTGCCTGAACCAACTTCATGAACACCCTCCTCCTGAAAGCTCCTTCTCACCTTCTCAAACACTCTACAAAACCAAAATCCCCTTATGTCTCATTCACTCTCAAACGTCAACTACTCCTACATCAACCCACACAAGCTCTTTCTTTGGCCCCAAGATTCTGTCATCATCCCCTCACCAACACTTCTACTTCCATGAACCTCACAGCCCCTCCCTCCGTTGTTGTTTTAATGTCCCTTCCAGACGTTGGGGTGCCTTCAAGCTTGGTTGCACCTCCATGGACCCTCAAGTAGATTTCTCATCATCTCTTCACTCTCCTTCTCAGATTATTAAAAAGAAAATTACTGGGCGGCAAAAGAGAGAGGAACTTGAAAGAGAGATTGCTATGCTTCAAAGGTTGTTGAACCAAGAAGAAAAGTTTCATGAGATTTTGGAGATGGTGCATAATAGACCAAATGGGTCAGCTATATCAATTCCCAATTTTCTTTCACCCAAGATAAGAGAACTGCTAGGAGAGCTAGTGATGGTAGAGAGTGAAATTGCACGACTTGAAAGCCAAATAAGCCAACTCCAAGCTGGTTTGAAACATGAACAAGAAGTGACCAAGGAATCAAAGTCTAAAACGTGGAATCAAGGGAATTTGAGTAATTCTAACAATCACTTATCAGCTTCTCCGCTTCCAAATCCTAGTCCTATTCGCAGAAGTGTTCAAGAAAGGATGGCATTTGAAACCAAGGCGTTGCATTTCATAAGCAAAGCTATAAAGGGTGATTACAATCTCAATGACTTCAGTCTTAATGAAAAAGCAGGTTTTCTGAAAACTTCTGTAGAACAGAAAGAAAATAAGTTCCAAGAAGATGTGAAATTTCAAGAAAGAATTCCAAGAAAAAATGGGATAGTAAAACCTCCCTCACCTATGCGTGACCCTCGTCATCCATCTCCCAAGCTGCGGGAACGCAATCCAGAGATGTACTTGGATCTCCCAACTAGATCACTATTGGATCCACTTCTGTCAGAAGAGAATGATCTCAAGTGGCAACCCAACAAGCTCTCTGAGAGCATCATGAAGTGTTTGAATTTCATATATGTAAGACTACTCAGAACATCAAGAGCAATGGAATTGGAGAAATCAGGGCCCATTTCAAGGTCTGTGCACTCTTCTTTAAGCTCAAGAAGCTTCAGAGTGGATACTGGGTCAAACCCAAAACCAAGCCACTTGTTGCAAAAGGAATTTAGGCAGCAAGACCCTTATGGTATCTTTAACACAGAAGAGTCCATTCCAAGGGACATTGGTCCTTACAAGAACCTGGTTATATTCACTTCCAGCTCTATGGATCCCAAGTTTATCTCAAGTCCATCCTCTATACCATTACTAAGGAAGTTAAGAATCTTGATGAGCAATCTTCAAACAGTTGACTTGAAAAGCCTTACAAACCAACAGAAATTAGCATTCTGGATCAACGTGTACAATGCTTGTATCATGCATGGATTTATCCAATATGGAGTGCCATCCACCCCAGAGAAACTACTTGCATTGATGAACAAGGCAACCCTCAATGTAGGAGGCAACCTAATAAATGCTCAAACAATAGAGCATTTCATATTGAGGAAACGAGATATTTCTAACATGAAAGAGGTTCAGCATAAGGGTGAGTGGGAAGAGAAAGAATCAGTTGTTCGTGAACTTTATGGACTTGAGTTTGTTGATCCTAATGTCACATTTGCTCTGTGTTGTGGAACTCGTTCTTCTCCTGCTGTGAGGATATACACAGCAGATGGAGTTACAACTGAATTGGAGAAATCAAAACTAGACTATCTTCAAGCTTCAATTCTAGCCACTAGCACCAAAAGAATAGGATTTCCAGAGCTTCTTCTCATAAACATGCTTGATTTTGCTGCAGATATAGAATTGTTGGTGGAGTGGGTATGTAGCCAGTTACCAACATCAGGCACTCTAAGGAAATCAATGGTGGATTGCTTTAGAGGCCACAATAATACTAATTCTGTGAAGGCTTCTACCATTGTTGAAAAGATACCCTATGACTATGAATTCCAGTATTTGTTGACAATATAA 2127 0.409 MMSHSHQHPQPQQRRLLSLCLNQLHEHPPPESSFSPSQTLYKTKIPLCLIHSQTSTTPTSTHTSSFFGPKILSSSPHQHFYFHEPHSPSLRCCFNVPSRRWGAFKLGCTSMDPQVDFSSSLHSPSQIIKKKITGRQKREELEREIAMLQRLLNQEEKFHEILEMVHNRPNGSAISIPNFLSPKIRELLGELVMVESEIARLESQISQLQAGLKHEQEVTKESKSKTWNQGNLSNSNNHLSASPLPNPSPIRRSVQERMAFETKALHFISKAIKGDYNLNDFSLNEKAGFLKTSVEQKENKFQEDVKFQERIPRKNGIVKPPSPMRDPRHPSPKLRERNPEMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPISRSVHSSLSSRSFRVDTGSNPKPSHLLQKEFRQQDPYGIFNTEESIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKSLTNQQKLAFWINVYNACIMHGFIQYGVPSTPEKLLALMNKATLNVGGNLINAQTIEHFILRKRDISNMKEVQHKGEWEEKESVVRELYGLEFVDPNVTFALCCGTRSSPAVRIYTADGVTTELEKSKLDYLQASILATSTKRIGFPELLLINMLDFAADIELLVEWVCSQLPTSGTLRKSMVDCFRGHNNTNSVKASTIVEKIPYDYEFQYLLTI* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0846 708 MobiDBLite consensus disorder prediction 223 249 - -
Pvu11g0846 708 MobiDBLite consensus disorder prediction 216 250 - -
Pvu11g0846 708 Coils Coil 131 158 - -
Pvu11g0846 708 Coils Coil 184 218 - -
Pvu11g0846 708 PANTHER EXPRESSED PROTEIN 117 708 - -
Pvu11g0846 708 MobiDBLite consensus disorder prediction 314 336 - -
Pvu11g0846 708 Pfam Protein of unknown function, DUF547 492 624 IPR006869 -
Pvu11g0846 708 Pfam Leucine-zipper of ternary complex factor MIP1 134 215 IPR025757 -
Pvu11g0846 708 PANTHER TRANSPORTER, PUTATIVE-RELATED 117 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0846 Pvu-Chr11 7772498 7778012 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0846 - - gmx:100809848 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0846 11 7772498 7778012 Pvu11g0846 11 7772498 7778012 ECH