Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0832 ATGGCCGGCAAAGGTGGGGCGACTCCGGCGACATACTCGCCGTCTCTGACAGTCGATAAAAAGAAACCACCGCTTTTCAAGGAAGATTGGGTTCGGCCCGATGGCCGCGGTTTCCACCAGTGCAGACCCGCATTTTTCAGGACTGGTGCTGTGAATGCAGCATCTGGATCTGCTTATGCCGAGGTTGGAAATACCAAGGTCATTGTATCTGTATTTGGGCCAAGAGAGAGCAAGAAGGCAATGATGTACAGTGATACAGGGCGTTTGAATTGCAATGTCAGCTTTACAACATTTGCAACTCCAGTGCGAGGGCAGGGTTCAGACCACAAAGAGTACAGTGCAATGCTTAATAAAGCTTTGGAGGGTGCAATAATACTGGAAAGTTTCCCCAAGACAACTGTGGATGTTTTTGCATTGGTGCTAGAATCTAGCGGCAGTGATCTCCCAGTTGTCATATCGTGTGCTAGCCTTGCCCTGGCGGATGCTGGAATAATGATGTATGATCTTGTTGCCTCGGTTTCTGTGTCAAGTTTTAGTAAGAACCTTGTCATTGATCCTATTTTGGAGGAGGAAAACTGCCAAGATGGTAGCTTAATGATTACCTGTATGCCTTCTCGCTATGAAATCACCCAACTCACCGTTACCGGGGAATGGTCTTCTCCGAGGATTAACGAGGGAATGCAGCTGTGCTTGGATGCTTGTGCAAAGCTAGCGAAGATTATGAGATCATGTTTGAAAGAAGCTGCTTCGGATTCCAGGGAGTAG 765 0.4771 MAGKGGATPATYSPSLTVDKKKPPLFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEVGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSFTTFATPVRGQGSDHKEYSAMLNKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSSFSKNLVIDPILEEENCQDGSLMITCMPSRYEITQLTVTGEWSSPRINEGMQLCLDACAKLAKIMRSCLKEAASDSRE* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0832 254 PANTHER EXOSOME COMPLEX COMPONENT MTR3 18 249 - -
Pvu11g0832 254 PANTHER EXOSOME COMPLEX COMPONENT 18 249 - -
Pvu11g0832 254 CDD RNase_PH_MTR3 41 247 - -
Pvu11g0832 254 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Pvu11g0832 254 Pfam 3' exoribonuclease family, domain 2 168 218 IPR015847 -
Pvu11g0832 254 Gene3D - 19 253 IPR027408 -
Pvu11g0832 254 SUPERFAMILY Ribonuclease PH domain 2-like 166 250 IPR036345 -
Pvu11g0832 254 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 195 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0832 Pvu-Chr11 7589598 7594408 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0832 K12587 - gmx:100816271 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0832 11 7589598 7594408 Pvu11g0832 11 7589598 7594408 ECH