Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g0829 | ATGATAGAGAAGACACAGTGTGAGAAAAAAGGAAACATGGAAGGTGAAGGAACTGAGATGAAACAAGAATCCAGGTTCAAGAGGATTTGTGTGTTCTGTGGAAGTAGCCCTGGGAACAAAAGTAGCTATCAGGATGCTGCTATTGAGCTTGCGAAAGAGTTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGGTTTCGCAGGCTGTTTATGATGGAGGTCGCCATGTAATTGGGGTTATTCCCAAGACACTCATGCCAAGAGAGATCACTGGAGAGACAGTGGGGGAAGTGATGGCAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCTCGCCACTCTGATGCCTTTATTGCCTTACCCGGTGGCTATGGGACACTTGAGGAGGTTCTTGAGGTCATAACTTGGGCTCAGCTTGGCATCCATGATAAACCAGTGGGGTTGCTGAATGTAGATGGATACTACAATTCCTTGTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATCAGCCCCAAAGCTCGCCACATAATTGTATCCTCCCCATCATCCAAAGAGCTTGTCAAAAAGATGGAGGAGTATTTTCCACAACATGAAAGAGTTGCCTCTAAGCTGAGCTGGGAAACTGAGCAGATAGAATACTCCTCAAGTTGTGAGATGTCTAGGTGA | 699 | 0.4578 | MIEKTQCEKKGNMEGEGTEMKQESRFKRICVFCGSSPGNKSSYQDAAIELAKELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPREITGETVGEVMAVADMHQRKAEMARHSDAFIALPGGYGTLEEVLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSSPSSKELVKKMEEYFPQHERVASKLSWETEQIEYSSSCEMSR* | 233 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g0829 | 232 | Pfam | Possible lysine decarboxylase | 71 | 201 | IPR031100 | - | |
| Pvu11g0829 | 232 | TIGRFAM | TIGR00730: TIGR00730 family protein | 27 | 204 | IPR005269 | GO:0009691|GO:0016787 | |
| Pvu11g0829 | 232 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Pvu11g0829 | 232 | Gene3D | - | 16 | 203 | - | - | |
| Pvu11g0829 | 232 | PANTHER | LOG FAMILY PROTEIN YJL055W | 20 | 232 | - | - | |
| Pvu11g0829 | 232 | PANTHER | CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 | 20 | 232 | - | - | |
| Pvu11g0829 | 232 | SUPERFAMILY | MCP/YpsA-like | 25 | 204 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu11g0829 | Pvu-Chr11 | 7544162 | 7548685 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu11g0829 | K22522 | - | gmx:100815735 | 433.721 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu5g1385 | 5 | 36088586 | 36092426 | Pvu11g0829 | 11 | 7544162 | 7548685 | PCT |