LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu11g0819	ATGAACGACGACGAAACAGAGTCAGAGGGAGAGATTAGGGCTTCCGTCGAACTCGCTTCGGAAGACGCTCCATCCAGCCCCGGTAGCAGCGGGTACATCGGCGAAGGAGGCAGCACCAGCGCAACCACCGGTTCACAATTCGAAATTGAGCATGAAGAAATAGAAGAGGACACGACGATTGCTATGGACAGAATCTCGATATCGGATTCCCACACGTCGTGGATTGCCGGAAAACGGCACTTCGATGAGGATGATGGTTCCATATCGTGGAGGAAAAGGAAGAAGCATTTCTTCGTTCTCAGTCATTCCGGCAAACCTATATATTCCAGGTATGGAGATGAACACAGACTTGCAGGGTTTTCGGCAACTTTGCAAGCAATCATTTCCTTTGTTGAGAACGGGGGCGATTCTGTCAAATTGGTGAAGGCTGGAAGGCATCAGGTGATTTTTCTTGTGAAAGGACCAATTTACTTAGTCTGCATCAGCTCCACAGAAGAACCTTACGAGTCATTAAGGGGGCAGTTAGAGCTAATATATGGTCAGATGCTTGTTATACTAACAAAATCGATAAATAGATGTTTTGAGAAGAACCCAAAATTTGATATGACACCCTTGCTAGGTGGAACAGAAATTGTCTTCTCTTCTCTAATACACTCTTTCAGCTGGAACCCAGCTACATTTCTTCATGCCTATACTTGTCTCCCTCTTGCATACGCAACAAGGCAAGCTGCAGGAGCTATTTTGCAAGATGTTGCTGATTCAGGTGTTTTGTTTGCAATACTGATGTGCAGGCACAAGGTAATCAGTCTTGTCGGTGCTCAGAAAGCTTCCCTTCATCCAGATGATATGCTGCTTCTGGCCAACTTTGTCATGTCATCTGAATCCTTCAGGACATCAGAATCCTTTTCTCCAATATGCTTGCCAAGATATAACCCTTCAGCATTTTTGTATGCATATATCCATTACTTTGATGCTGATACGTACTTGATGTTACTAACCACTAATTCTGATGCATTTTATCATCTTAAGGATTGCAGGATTCGTGTTGAAAATGTTCTTCTGAAGTCTTGTGTCCTTAGTGAAGTTCAGAGATCCTTGTTAAACGGGGGAATGCATGTTGAAGATCTGCCACCTATATCTCATTCTGGGTCATCTCATTTGGGCCAGCACATGCTTCCATCAGATTCTCCTGACAGATTTAGGGAAGCTAATTCTGGCATTGGGGGTCCTGCTGGGTTGTGGCATTTCATATATCGCAGTATATATCTGGACCAGTATGTCTCTTCAGAGTTCCCATCATCAATTAATACGCCTCAGCTGCAGAAAAGACTGTATAGAGCTTACGAGAAACTTTTTGCATCCATGCATGATAAAGGAACTGGGCCTCACAAAACTCAATTTAGAAGAGATGAAAACTACGTTCTTCTCTGTTGGGTGACACAGGATTTTGAGCTCTATGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCAATCAAGACATGCAACCATGTTTGTCAGTGGATAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCATGGTGA	1581	0.4371	MNDDETESEGEIRASVELASEDAPSSPGSSGYIGEGGSTSATTGSQFEIEHEEIEEDTTIAMDRISISDSHTSWIAGKRHFDEDDGSISWRKRKKHFFVLSHSGKPIYSRYGDEHRLAGFSATLQAIISFVENGGDSVKLVKAGRHQVIFLVKGPIYLVCISSTEEPYESLRGQLELIYGQMLVILTKSINRCFEKNPKFDMTPLLGGTEIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRTSESFSPICLPRYNPSAFLYAYIHYFDADTYLMLLTTNSDAFYHLKDCRIRVENVLLKSCVLSEVQRSLLNGGMHVEDLPPISHSGSSHLGQHMLPSDSPDRFREANSGIGGPAGLWHFIYRSIYLDQYVSSEFPSSINTPQLQKRLYRAYEKLFASMHDKGTGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNHVCQWIKDVENEIFLLGASPFSW*	527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu11g0819	526	Pfam	Third Longin domain of FUZ, MON1 and HPS1	412	513	IPR043970	GO:0016192
	Pvu11g0819	526	MobiDBLite	consensus disorder prediction	1	46	-	-
	Pvu11g0819	526	Pfam	First Longin domain of FUZ, MON1 and HPS1	95	216	IPR043972	GO:0016192
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	95	112	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	113	133	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	147	161	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	198	210	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	227	248	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	251	264	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	275	291	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	300	323	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	328	354	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	475	489	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	491	504	IPR004353	GO:0006623
	Pvu11g0819	526	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	504	524	IPR004353	GO:0006623
	Pvu11g0819	526	Pfam	Second Longin domain of FUZ, MON1 and HPS1	256	348	IPR043971	GO:0016192
	Pvu11g0819	526	PANTHER	SAND PROTEIN-RELATED	13	526	IPR004353	GO:0006623
	Pvu11g0819	526	MobiDBLite	consensus disorder prediction	22	46	-	-
	Pvu11g0819	526	PANTHER	BNAC04G15860D PROTEIN	13	526	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu11g0819	Pvu-Chr11	7384114	7390777	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu11g0819	K20195		-	gmx:100814534	853.203

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu5g1393	5	36225542	36231379	Pvu11g0819	11	7384114	7390777	PCT