Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0808 ATGGCACAGGGGAAGATAATTGCACAAGAAGTATCAAGAAGAATCGTGACATGGAACAGAATTGAGAAGAGGGACATCATAAGCACCATGCCAAATGAGATCATTGCAAATGTTTTATCACGGTTGACATTGAAAGAAGCTGCTAGGACTAGCGTGTTGTCAACTACATGGAGATATCAATGGACCTATTTCTCTGGGGACGTGGACTTTGATCATTCACTTAGGACTCTTCTCTTGCGTCATGAGAATGTTGGAGTTTTGACCAAGTGCAATGTTTTTGTTCGTGATTGGGAGAGGTTCATGAGCCGTTTGCAACACGTGCTGAAATCGCTGAAATGTCACTCCATGCAAGGACTCAGAATCTGCATGGATATGGGTAACCCTTGGAAGGTGGCTGAATGGGTGAAGTTTGCTGCTCAGAAGAATGTTGAAACGTTGGACCTGGATTTTTCATACAATTTCATGGAACCATTCTTTGAAATGAGTGAGAACATTCGTAATGTGTTATCAAGGAGTTTTGAGATGAGGGCACTGAAAGTCCTGCGTTTGGCTTCTGTTGATGTGAGTGGTGAGATCATTGAGAGTTTTCTAGCATCTTGTCCAGTGCTTGAAACATTATGTATCAGAGGATCAAAAAGCCTTGAGAGCTTGAAAGTTCAGGGTGAAGGACTGAGGTTGAAGCATTTGGAGTTGGTTGAATGTCATATTTTGTGTCTTGATATCTGTGCTGAAAATCTTATGACATTCACGTACACTGGAGATTATGGAAAGTTGAACTTTGAAGCTGTTCCAAGCCTGGTGGAAGCCTCCTTTGGAGGAAAATATTGTAATTACCTGCTATCGAACATGAACGATGTTGAACTTTATGGAGTACTTTCGCAGGTTCATGTTCTGAAATTGGAACTGTTTATACTTTATGGGGAAATTCTTGAAGACCTGCCTGTGTTAGGTAATGTGAGGCAGCTGGAACTGCGAATTCGTCACAGGTGTGGAGGGCAGCTTGATCGTACTGTTTCATTACTAAGTTCTTTCCCTTCAATATCTGTGCTTAAGATTAAGTTCATGAGGACCACTATCTGGGAAGTGGATGAGGAGTGGAAGGCCAATCTGAAGCACGAGTATGCAAACCTGAGGGAGCTGGAAGTGTCCGGGTACAGAAGAGACTCCTGTCAAATTGAGTTGCTGATCAGCATATTTAAAAAGGCACCTAATCTCAACAGGATTGTTGTGGATCCCTTGGCTTCAATGCATGTGCAAAGGTCAGCTGATGTTAAGGCCAGCATTAGAGAAAGGCAACGTGATATGACCATATGGTATGTTGATGCTCTCAAACCACATGTTTCTCCTTCAACTCAGTTGACTGTGCTCTAA 1371 0.4252 MAQGKIIAQEVSRRIVTWNRIEKRDIISTMPNEIIANVLSRLTLKEAARTSVLSTTWRYQWTYFSGDVDFDHSLRTLLLRHENVGVLTKCNVFVRDWERFMSRLQHVLKSLKCHSMQGLRICMDMGNPWKVAEWVKFAAQKNVETLDLDFSYNFMEPFFEMSENIRNVLSRSFEMRALKVLRLASVDVSGEIIESFLASCPVLETLCIRGSKSLESLKVQGEGLRLKHLELVECHILCLDICAENLMTFTYTGDYGKLNFEAVPSLVEASFGGKYCNYLLSNMNDVELYGVLSQVHVLKLELFILYGEILEDLPVLGNVRQLELRIRHRCGGQLDRTVSLLSSFPSISVLKIKFMRTTIWEVDEEWKANLKHEYANLRELEVSGYRRDSCQIELLISIFKKAPNLNRIVVDPLASMHVQRSADVKASIRERQRDMTIWYVDALKPHVSPSTQLTVL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0808 456 PANTHER - 11 415 - -
Pvu11g0808 456 Pfam F-box domain 27 59 IPR001810 GO:0005515
Pvu11g0808 456 PANTHER F-BOX PROTEIN-LIKE 11 415 - -
Pvu11g0808 456 SUPERFAMILY RNI-like 87 406 - -
Pvu11g0808 456 Gene3D Ribonuclease Inhibitor 72 427 IPR032675 -
Pvu11g0808 456 Gene3D - 8 62 - -
Pvu11g0808 456 SUPERFAMILY F-box domain 23 63 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0808 Pvu-Chr11 7264601 7268579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0808 25 206 EF-hand Containing Proteins AT5G41840 26.842 1.89e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0808 - - gmx:100778140 581.252