Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0807 ATGACAAAGAAAATACGTTTGGCTTGTTCCTTGCAGGAGGATGAAGGGAAAGGGAATAATAGCTTTGTGGATTTAGATACAAGGGAGGGAGTGAATGATGGTTTTCCTAGAATTGGACCAAATGATTCGCTTCTCCCTGGTCTTTTTGATGATGTTGCGCTAAATTGTCTTGCTTGGGTTAGTAGATCTGATTATGCTTCACTCGCATGTATAAATAGACGGTACAACTTGTTGATTAGGAGTGGGTATCTGTCCGGGTTGAGGAAGAAGTTGGGGATTGTGGAGCTAGAGCATTTGGTTTATTTGGTTTGTGATCCAAGAGGGTGGGAGGCATTTGACCCCAAGAGAAATAGATGGATAACATTACCTAAAATACCTTGTGATGAGTGTTTTAATCATGCAGACAAGGAGTCCTTGGCTGTGGGGAGTGAATTGTTGGTTTTTGGTCGGGAATTGATGGATTTTGCCATTTGGAAGTACAGCTTGATTTGCCGTGGTTGGGTGAAGTGTCAGGAGATGAATCGACCCCGGTGCTTGTTCGGATCTGGCAGTCTTGGTTCAATTGCTATTGTTGCTGGTGGAAGTGATAAATTTGGAAATGTTCTTGAATCGGCTGAGTTGTATGACTCTTCTTCAGGTATATGGGCACTGTTGCCGAACATGCACACACCACGTAGATTGTGCTCTGGTTTTTTCATGGATGGAAAATTCTATGTGATTGGTGGCATGTCAAGTCCTACTGTTTCATTGACTTGTGGGGAGGAGTATGATCTTAAGACAAGAAATTGGCGGAAAATAGAGGGTATGTATCCATATGTTAATGGGGCTGCTCAGGCTCCTCCGCTTGTGGCAGTTGTGGATAATGAGTTGTATGCAGTTGAGCATCTTACCAACATGGTAAAGAAATATGACAAGGAAGATAACACCTGGAGCGAATTGGGAAGGCTTCCAGTACGGGCGGATTCTTCAAATGGATGGGGCCTGGCTTTCAAGGCTTGTGGAGAGAAACTTCTGGTTGTGGGTGGACAAAGGGGTCCAGAAGGTGAAGCTGTTGTACTGAATTCATGGTGTCCTAGGACGGGGGTCAGGAGTGGAACCATAGACTGGCAAGTACTTGGTGTGAAGGAGCACGTTGGGGTGTTTGTTTACAATTGTGCTGTTATGGGATGGTCTGGTGAGATGCTTCTAGATTGA 1194 0.4464 MTKKIRLACSLQEDEGKGNNSFVDLDTREGVNDGFPRIGPNDSLLPGLFDDVALNCLAWVSRSDYASLACINRRYNLLIRSGYLSGLRKKLGIVELEHLVYLVCDPRGWEAFDPKRNRWITLPKIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLICRGWVKCQEMNRPRCLFGSGSLGSIAIVAGGSDKFGNVLESAELYDSSSGIWALLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDLKTRNWRKIEGMYPYVNGAAQAPPLVAVVDNELYAVEHLTNMVKKYDKEDNTWSELGRLPVRADSSNGWGLAFKACGEKLLVVGGQRGPEGEAVVLNSWCPRTGVRSGTIDWQVLGVKEHVGVFVYNCAVMGWSGEMLLD* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0807 397 SUPERFAMILY Kelch motif 108 347 IPR015915 GO:0005515
Pvu11g0807 397 SMART kelc_smart 188 235 IPR006652 GO:0005515
Pvu11g0807 397 SMART kelc_smart 236 288 IPR006652 GO:0005515
Pvu11g0807 397 Pfam Kelch motif 224 269 IPR006652 GO:0005515
Pvu11g0807 397 Pfam Kelch motif 176 221 IPR006652 GO:0005515
Pvu11g0807 397 Gene3D - 100 375 IPR015915 GO:0005515
Pvu11g0807 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 33 389 - -
Pvu11g0807 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 33 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0807 Pvu-Chr11 7260728 7263068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0807 48 267 Miscellaneous Gene Families AT4G33900 25.455 1.02e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0807 - - vun:114169266 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0807 11 7260728 7263068 Pvu11g0807 11 7260728 7263068 ECH