Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0805 ATGAGCAGAAACGATTCGAAGTACTTCTCCACCACCAAGAAGGGTGAAATCCCTGAGCTCAAAGAGGAACTCAATTCTCAGTACAAGGATAAAAGAAAAGATGCAGTGAAAAAGGTGATTGCTGCTATGACAGTTGGGAAGGATGTCTCTTCATTGTTCACAGATGTGGTGAATTGCATGCAAACAGAAAATTTAGAGCTGAAAAAGTTGGTTTACTTATACCTGATAAATTATGCAAAGAGTCAGCCGGATCTTGCTATACTTGCTGTAAATACATTTGTGAAGGATTCGCAAGATCCAAATCCTTTAATTCGTGCCTTAGCTGTACGGACAATGGGCTGCATTCGTGTTGATAAAATTACTGAGTATCTATGTGATCCCCTTCAAAGATGCCTGAAGGATGACGATCCATATGTTCGTAAGACAGCAGCCATTTGTGTCGCAAAGCTATATGACATAAATGCAGAGTTGGTTGAGGACAGGGGGTTCTTGGAATCTCTGAAGGACTTGATATCTGATAATAATCCAATGGTTGTAGCTAATGCAGTGGCAGCACTTGCTGAAATTCAGGACAATAGTAGTAAACCCATCTTTGAGCTCACAACTAACACGCTTACAAAGCTCCTCACTGCTTTAAATGAATGTACAGAATGGGGTCAAGTTTTTATACTGGACGCCCTTTCTAGGTACAAGGCAGCTGATGCTCGTGAGGCAGAAAACATTGTAGAAAGAGTTACTCCGAGGTTACAGCATGCCAATTGTGCAGTTGTACTATCGGCTGTTAAGATGATCCTTCAACAGATGGAGCTCATAACCAGTCCTGACGTGGTTCGGAATCTTTGTAAAAAGATGGCTCCTCCTCTTGTGACATTGCTCTCAGCAGAACCTGAGATACAATATGTTGCCCTGCGGAATATCAATCTTATAGTACAAAGAAGGCCAACAATTCTTGCTCATGAAATTAAGGTGTTCTTCTGCAAGTACAATGATCCAATCTATGTGAAAATGGAAAAGTTAGAAATCATGATAAAACTTGCTTCAGACCGAAATATAGATCAGGTTTTATTGGAATTTAAGGAATATGCTACTGAGGTGGATGTAGATTTCGTTAGAAAAGCAGTTCGTGCAATTGGTCGTTGTGCCATCAAATTAGAAAGAGCCGCTGAAAGATGTATTAGTGTTTTGCTTGAATTGATCAAGATAAAAGTAAATTATGTGGTTCAAGAGGCTATCATTGTCATCAAAGATATATTTAGAAGATACCCCAACACCTATGAGTCCATAATTGCAACACTTTGTGAGAACTTAGATACCTTGGATGAGCCTGAAGCCAAGGCATCGATGATTTGGATAATTGGTGAATATGCGGAGAGAATAGACAATGCTGATGAGCTTCTTGAAAGTTTCTTGGAAAGCTTCCCTGAAGAACCTGCACAAGTCCAACTACAATTGTTGACAGCTACTGTAAAACTTTTTCTCAAGAAGCCAACCGAAGGCCCACAGCAGATGATTCAGGTTGTTTTGAACAATGCCACTGTGGAAACAGATAATCCTGATTTGCGAGATCGTGCATACATATATTGGCGTCTCCTCTCAACTGACCCTGAGGCAGCCAAGGATGTTGTGTTGGCAGAGAAGCCAGTGATAACTGATGACTCAAACCAACTTGATCCCTCCCTACTTGACGAGCTTCTTGTCAACATTGCTACATTATCTTCTGTTTATCACAAGCCCCCAGATGCATTTGTGACCCGCACACACTCGTCAGCCCAGAAAACTGAAGATGGTGACTATCCCGAGGGAAGTGAACTAGGGTACTCTGTGTCACCTGGGAATCCTGCTAATGGGGCTGCTTCACCACCAAGTTCAAGCTATTCAATGCCTGCATCTGTTGCACCAGCTTCACCTCCACCAGGTGCCCCTGTCCCCGATTTACTCGGGGATTTGATGGGCATGGATAATTCTGTTGTTCCTCTTGATCAGCCAGCTACTCCTGCCAGACCTGCATTGCCTATTGTACTTCCCGCTTCTACTGGTCAGGGTTTACAAATCAGTGCACAGCTGACCAAGCAAGATGGTCAAATATTTTACAGTATGTTGTTTGAAAACAACACTCAAGTTCCACTTGACGGCTTCATGATTCAATTTAACAAGAACACATTTGGTCTAGCAGCTGCTGGACCCCTCCAGGTTCCACAATTACAACCTGGAACATCAACTAGTACACTCCTTCCAATGGTTTTGTTCCAGAACATGTCCCAAGGTCCTCCTAGCTCACTTTTGCAGGTTGCTGTAAAAAACAACCAACAACCCGTTTGGTATTTTAACGATAAATTCTCATTCCATGTACTTTTTACCGAGGATGGTAAAATGGAACGTTCTACTTTCTTAGAGACTTGGAGGTCCCTTCCTGATTCAAACGAGGTATCAAAGGAATTCTCAGACATTGTGGTTGGCGGTGTGGAAGTGACCTTGGACCTACTCGCTTCATCAAACGTGTTCTTTATTGCAAAACGCAAGAATGCCAACCAAGATGTGTTTTACTTCTCAGCTTCGGTCCCTCGAGGGATACCGTTATTAATTGAGCTTACCACAGTGGTCGGAAACCCTGGTGTCAAATGCGCAATCAAGACACCAAGCCCTGAAATGTCGGCATTTTTCTTTGAAGCCATCGAGACTCTTCTCAGGAGCTAA 2694 0.4261 MSRNDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMVVANAVAALAEIQDNSSKPIFELTTNTLTKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSPDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCENLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVITDDSNQLDPSLLDELLVNIATLSSVYHKPPDAFVTRTHSSAQKTEDGDYPEGSELGYSVSPGNPANGAASPPSSSYSMPASVAPASPPPGAPVPDLLGDLMGMDNSVVPLDQPATPARPALPIVLPASTGQGLQISAQLTKQDGQIFYSMLFENNTQVPLDGFMIQFNKNTFGLAAAGPLQVPQLQPGTSTSTLLPMVLFQNMSQGPPSSLLQVAVKNNQQPVWYFNDKFSFHVLFTEDGKMERSTFLETWRSLPDSNEVSKEFSDIVVGGVEVTLDLLASSNVFFIAKRKNANQDVFYFSASVPRGIPLLIELTTVVGNPGVKCAIKTPSPEMSAFFFEAIETLLRS* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0805 897 Pfam Adaptin N terminal region 15 533 IPR002553 GO:0006886|GO:0016192|GO:0030117
Pvu11g0805 897 PIRSF Beta_adaptin 1 727 IPR016342 GO:0015031|GO:0030276
Pvu11g0805 897 Gene3D - 667 779 IPR013037 GO:0006886|GO:0016192
Pvu11g0805 897 SUPERFAMILY Clathrin adaptor appendage domain 668 782 IPR013041 -
Pvu11g0805 897 PANTHER BETA-ADAPTIN-LIKE PROTEIN B 1 895 - -
Pvu11g0805 897 SMART alpha_adaptinc2 666 776 IPR008152 GO:0006886|GO:0016192
Pvu11g0805 897 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 784 896 IPR009028 GO:0006886|GO:0016192|GO:0030117
Pvu11g0805 897 SMART B2_adapt_app_C_2 785 896 IPR015151 GO:0006886|GO:0016192|GO:0030131
Pvu11g0805 897 Pfam Beta2-adaptin appendage, C-terminal sub-domain 786 895 IPR015151 GO:0006886|GO:0016192|GO:0030131
Pvu11g0805 897 Pfam Adaptin C-terminal domain 680 775 IPR008152 GO:0006886|GO:0016192
Pvu11g0805 897 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 1 895 IPR026739 GO:0016192
Pvu11g0805 897 SUPERFAMILY ARM repeat 8 581 IPR016024 -
Pvu11g0805 897 Gene3D - 781 897 IPR012295 -
Pvu11g0805 897 Gene3D - 3 592 IPR011989 -
Pvu11g0805 897 MobiDBLite consensus disorder prediction 608 630 - -
Pvu11g0805 897 MobiDBLite consensus disorder prediction 582 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0805 Pvu-Chr11 7234817 7242293 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0805 K12392 - gmx:100784577 1597.02