Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0803 ATGGAATCGCCCAACGCCAGTGACGATAATAGGTTTTCGAATCCAAAAGCAAACGCGAACGCGACGACCTCAACCTCAGGTTTCACGTTCAGTAGCACCTCTTCCGTTTCGGGCCTGTCCCGGCCGAGACTCGTCAAGGTTCGGAAGCCTAACCACGCCCCCGCTTTCAATCCGTTTGGCGGCGGTGCTGCTGCCAATGCAGCATTTGCGAGCCACGATTTTGCTTCGGGAATCGGCGATCGATTCCAGAATCTCAAAATCGGCGAAGGTTTCGACGCCACACGCCACGGTGAGTTCGTGTTCGGCGCTAATGCTTCTTCGCGTGTTAATGAAAACTCGGTCTCTGAACAGATGAACAAGTTGAAGATTGTAAGCGAAGGTGGACCGGGTTTTAACGAACCAGAACTGCGGAGTGACCTGAGGAAGAAATTGAACATTAAGAAAGGAAGAGGTAAGAATGCTGCTACTGAGACCTCAACTCATGAAGTTTTATGTCAATTGAAGAATCTGAATGTGAATGACTCTGTTGGTAGTAATGTTCTCAAGAGTAAAGTTGATGGTAAACCTGGTTTGGAGAATGTGTCTACGTTTGGAAAATGTGAAATTGAAGCTGATTTGTTGGGGAGAATGGAGAAGTTAAACCTAGTTAAGGAGAAGAAGGAGGATGGTGTTGAACCGAATTTGTGCAATCCTTTTGCGGAGGCAATGGACCGAAGAGGTGGTGCTAGTGGTGGTGGTGCTCAAGTTATTTTTGAAGATAGTGGGGTGTCACATAGTGCTGCGTCGGCTTCGCCCTTCTTTCAGCCTGTTGGAGTGAGCAAGACAGAGGGATTTGTGTTTACTGGTAAGAAAGATAGTTCAGGGTCGTCTTTTGTTGAGTTTAAAACACCAGCACCAAAAGTTGGCAAAGAAGGAAAACTTAAACAAAAAAGTGGCAAAATGAGAATGAATAGAAGTAGAGAAAATCTGAAGCATTACAGCTCAACGCAGCGATGGCAGGGAGAGGGTTTTGTTGTGAAGGAAAGTGTTCCCCAGGACCAACCACAGGGTTCACCGATGGATGTGTCACCATATCAGGAAAAGCTGGCTGAAAATGAAAGGTCCAGGGAAAGTTCTTTGACTTCCGAGGAGTTATGTAGTGTTGATAAGAACCCTGCAGTTAATGATTCAGTACCAACATCATCTGTTGATCCCATTGACGAAGATCTAATTGCCGCAACAGAGAGCTTGAATATAAATGAGGTTGATGTTGCCTGCACAGATACAAACCAGGAAACTTCAGAGGATCAAATGCGTGCAAATAGTTGTGTTGAAGACCCCAAGGATGAGTCAATTTCAGGGGTTGAAACTGAAAGCTTTAAGTCTGCCAATGATCAAGTGGACATAACTAGTGACGGGGCTGGTGTATCAGGAGAAACCGAAGCCCATAGTGCTAGAATGTTGCATGTCGGTAGTGCTTTGAGTTCAAGAAAAGCAAGTGAGTCTGCCTTCACATTCGCTGCTGCTTCTTCAGCTGAAACTCAATCATGTAGTCCAAAACGACATCTCAAAAAGAAAAGTGCTGCTCACGATTCTTACAACTACGCACCAAACATAAAGGTTCCTTATTCATCATCTTCCGTGGCATTTACTCCATTTTCTGGAACTTCATCTCTTTTCACTTCAGGACAAGGTTTAAAACCCAAAGTATCCTCTCCTCAGCCCAAAACAAGTGATTCTAATGAAAATGAGGAGAAGGGGTTAAAGGAGACTTATGCTTCTATTTCTGTTGCAAGCGTTGCTGCTCAGGAAGCCTGTGAAAAGTGGAGGCTTCGAGGAAACCAAGCCTATAAAAAGGGGGATCTTTCTGCGGCTGAGAATTGTTACAAACAAGGACTTAGTTGTGTATCGAAAGTAGAAGCATCTCGTAGCTGTCTCAGGGCTTTGCTGCTATGTTACAGCAACCTTGCTGCCACACACATGTCTCTTGGTAGGATGAGAGATGCACTGGAAGATTGTAAGATGGCTGCTGAAATAGATCAAAATTTTCTCAAGGTGCAGCTTAGAGCTGCAAATTGTTACCTTGCTCTGGGAGAAGTTGAAGGTGCATCACAGAATTTTAAAAGATGCTTGCAATCCGGAACTGATGTTTGTGTTGATCGGAAAATTGCTGTTGAAGCCTCTGATGGCTTACAAAAGGCACAGAAAGTATCAGATGTCATCAATCATTCTGCTCAACTTTTGCTTAGACGGACATCCTCTGATGCAGAGAGAGCACTGGAACATATTAATGAGGCGTTAATGATAAGTTCATACTCTGAAAAATTGCTCGAAATGAAAGCAGAGGCTCTGCTAATGCTTTGTAGATATGACGAGGTGATTCACCTGTGTGACAAGACCCTTGATTCCGCGGAGAAGAATGCCTGTCCATTGGATGCTGGTGGCGAAGTCACAGATCTGGATAATTCACAACTCTCAAAAGGTTTCTACTTCAGAATTTGGCGATGCTCAATGATGCTTAAAGCCTGCTTTCACTTAGGAAAATTTGAAGAGGGTCTTTCTTTGCTGGAGCAACAACAGGAAAAGATGTCTGCCATAAACAAGAGTGGAAGCAAGGTTTTGGATTCACTCATACCACTAGCTGCTATCATACGTGAGCGCTTGCATCATAAGACTGCAGGGAATGCAGCATTTCAAGCTGGAAGGCATGCAGAAGCCGTTGAACACTATACATCTGCTTTGGCATGTAATGTGGAGTCTCGTCCTTTTGCAGCTGTCTGTTATTGTAATCGTGCAGCTGCCTATAAAGCTTTAGGTCAAATAACTGATGCTGTTGCAGATTGCAGTCTAGCTATTGCTCTTGATGGAAATTATTTGAAGGCACTTTCTAGACGTGCAACTCTGTATGAGATGATCAGAGATTATGCCCAAGCAGCCAGTGATCTGAGGAGGCTTGTCTGTCTTCTTAGTAAGGGGGTGGAGGACAATGCCAATCAGCTTGGAATATCTGATAAATCAATTAATTATTCTAATGATTTGAAACAAAATCGTGTTCACCTTTCTGAAGTGGAAGAGGAAGCCAGAAAGGAGATCCCTCTCGATATGTACCTCATTTTGGGAGTTGAACCATCTGTTTCGATATCTGAAATCAAGAAGGCCTATCGGAAAGCTGCACTTAGACACCACCCCGACAAGGCTGGCCAGTCTTTGACCAAAAGTGACAATGTAGATGATCAGACATGGAAGGTTATTGCTGAAGAAGTACACAGAGATGCTGATAGGCTTTTCAAAATAATTGGGGAGGCATATGCTGTCCTGTCAGACCCTGCCAAGCGGGCTCGTTATGACGCAGAAGAAGAAATGAGGAATTCCTTAAAGAAACGGCATGGACCTATTGGTAGAAACAATGTAGATGCCCAGTATTACCCATTTGAACAAAGCAGCAGAAGACAGTGGAGAGAGGCTTATAGATCTTATGGTTATTCATCTACTCGACCCTCCGAAGCTGCCCGATCAAGCAGGAAATAA 3507 0.4417 MESPNASDDNRFSNPKANANATTSTSGFTFSSTSSVSGLSRPRLVKVRKPNHAPAFNPFGGGAAANAAFASHDFASGIGDRFQNLKIGEGFDATRHGEFVFGANASSRVNENSVSEQMNKLKIVSEGGPGFNEPELRSDLRKKLNIKKGRGKNAATETSTHEVLCQLKNLNVNDSVGSNVLKSKVDGKPGLENVSTFGKCEIEADLLGRMEKLNLVKEKKEDGVEPNLCNPFAEAMDRRGGASGGGAQVIFEDSGVSHSAASASPFFQPVGVSKTEGFVFTGKKDSSGSSFVEFKTPAPKVGKEGKLKQKSGKMRMNRSRENLKHYSSTQRWQGEGFVVKESVPQDQPQGSPMDVSPYQEKLAENERSRESSLTSEELCSVDKNPAVNDSVPTSSVDPIDEDLIAATESLNINEVDVACTDTNQETSEDQMRANSCVEDPKDESISGVETESFKSANDQVDITSDGAGVSGETEAHSARMLHVGSALSSRKASESAFTFAAASSAETQSCSPKRHLKKKSAAHDSYNYAPNIKVPYSSSSVAFTPFSGTSSLFTSGQGLKPKVSSPQPKTSDSNENEEKGLKETYASISVASVAAQEACEKWRLRGNQAYKKGDLSAAENCYKQGLSCVSKVEASRSCLRALLLCYSNLAATHMSLGRMRDALEDCKMAAEIDQNFLKVQLRAANCYLALGEVEGASQNFKRCLQSGTDVCVDRKIAVEASDGLQKAQKVSDVINHSAQLLLRRTSSDAERALEHINEALMISSYSEKLLEMKAEALLMLCRYDEVIHLCDKTLDSAEKNACPLDAGGEVTDLDNSQLSKGFYFRIWRCSMMLKACFHLGKFEEGLSLLEQQQEKMSAINKSGSKVLDSLIPLAAIIRERLHHKTAGNAAFQAGRHAEAVEHYTSALACNVESRPFAAVCYCNRAAAYKALGQITDAVADCSLAIALDGNYLKALSRRATLYEMIRDYAQAASDLRRLVCLLSKGVEDNANQLGISDKSINYSNDLKQNRVHLSEVEEEARKEIPLDMYLILGVEPSVSISEIKKAYRKAALRHHPDKAGQSLTKSDNVDDQTWKVIAEEVHRDADRLFKIIGEAYAVLSDPAKRARYDAEEEMRNSLKKRHGPIGRNNVDAQYYPFEQSSRRQWREAYRSYGYSSTRPSEAARSSRK* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0803 1168 MobiDBLite consensus disorder prediction 1 40 - -
Pvu11g0803 1168 PRINTS DnaJ domain signature 1029 1047 IPR001623 -
Pvu11g0803 1168 PRINTS DnaJ domain signature 1047 1062 IPR001623 -
Pvu11g0803 1168 PRINTS DnaJ domain signature 1084 1104 IPR001623 -
Pvu11g0803 1168 Pfam DnaJ domain 1027 1109 IPR001623 -
Pvu11g0803 1168 MobiDBLite consensus disorder prediction 374 395 - -
Pvu11g0803 1168 SUPERFAMILY TPR-like 600 797 IPR011990 GO:0005515
Pvu11g0803 1168 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 13 1167 - -
Pvu11g0803 1168 ProSitePatterns Nt-dnaJ domain signature. 1089 1108 IPR018253 -
Pvu11g0803 1168 MobiDBLite consensus disorder prediction 1 42 - -
Pvu11g0803 1168 MobiDBLite consensus disorder prediction 554 579 - -
Pvu11g0803 1168 MobiDBLite consensus disorder prediction 424 446 - -
Pvu11g0803 1168 ProSiteProfiles dnaJ domain profile. 1027 1112 IPR001623 -
Pvu11g0803 1168 SMART dnaj_3 1026 1104 IPR001623 -
Pvu11g0803 1168 SUPERFAMILY TPR-like 883 981 IPR011990 GO:0005515
Pvu11g0803 1168 MobiDBLite consensus disorder prediction 554 571 - -
Pvu11g0803 1168 Gene3D DnaJ domain 1013 1126 IPR036869 -
Pvu11g0803 1168 Gene3D Tetratricopeptide repeat domain 879 996 IPR011990 GO:0005515
Pvu11g0803 1168 MobiDBLite consensus disorder prediction 342 397 - -
Pvu11g0803 1168 SUPERFAMILY Chaperone J-domain 985 1108 IPR036869 -
Pvu11g0803 1168 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 13 1167 - -
Pvu11g0803 1168 SMART tpr_5 643 676 IPR019734 GO:0005515
Pvu11g0803 1168 SMART tpr_5 677 710 IPR019734 GO:0005515
Pvu11g0803 1168 SMART tpr_5 599 632 IPR019734 GO:0005515
Pvu11g0803 1168 SMART tpr_5 767 800 IPR019734 GO:0005515
Pvu11g0803 1168 SMART tpr_5 880 913 IPR019734 GO:0005515
Pvu11g0803 1168 SMART tpr_5 952 985 IPR019734 GO:0005515
Pvu11g0803 1168 SMART tpr_5 918 951 IPR019734 GO:0005515
Pvu11g0803 1168 CDD DnaJ 1027 1101 IPR001623 -
Pvu11g0803 1168 Gene3D Tetratricopeptide repeat domain 598 869 IPR011990 GO:0005515
Pvu11g0803 1168 MobiDBLite consensus disorder prediction 432 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0803 Pvu-Chr11 7216102 7225915 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0803 K09527 - gmx:100790770 1708.35