Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0800 ATGCAAAAGCAATATCTCTTTTCCTTCTCACTAGTACAGCTAGTTTCATTTCTGTATTTCACCACCACTTTAGCCCAATTATCACCAGCTACTTCTCCTCTAAAACCACCCCAACCTATTCCTACACCACCAGCTGCAGCCCCTAAACCTTTGGTTCCCTCGTTGCCAGAGTCACCAAGTGATGCCACTCCTGACACCGCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATCCTTATCCGCCTCATGAAGACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGTTCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGACTATGTGTCGAGCTCCAACTTTGATACTCTAACCAACCCTGTGAGAACACTTGCAGGAGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACAGGGGAGGTTAACACCACTATCACAGGCATTGTATACACAGATAAGCATCTTGCTATTTATAAGGTAGGAAAGGTGCTTCTTCCTATGGACTTCTTTGCAGTGGCCAAAGCACCTGCAAAATCACCCTCTTTGGCACCAGAACCATCTGCAAAGGCTCCTAAAGCGGATAAAGAGAATTCACTGTCCCCAGACTCCTCAGACTCATCTCAGATTAATTCCACAAAGGATAACTCTGGCACTGTGAAAATCAATGTGTACGGAAAGTGGCTGTCCCTTGTTCTTGGAGTAGTTCTCATGACTGTTTTCTCATCATAA 873 0.4548 MQKQYLFSFSLVQLVSFLYFTTTLAQLSPATSPLKPPQPIPTPPAAAPKPLVPSLPESPSDATPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFAVAKAPAKSPSLAPEPSAKAPKADKENSLSPDSSDSSQINSTKDNSGTVKINVYGKWLSLVLGVVLMTVFSS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0800 290 SMART fasc_3 110 215 IPR000782 -
Pvu11g0800 290 Pfam Fasciclin domain 80 214 IPR000782 -
Pvu11g0800 290 MobiDBLite consensus disorder prediction 226 261 - -
Pvu11g0800 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 289 - -
Pvu11g0800 290 MobiDBLite consensus disorder prediction 31 63 - -
Pvu11g0800 290 SUPERFAMILY FAS1 domain 66 215 IPR036378 -
Pvu11g0800 290 ProSiteProfiles FAS1/BIgH3 domain profile. 68 212 IPR000782 -
Pvu11g0800 290 MobiDBLite consensus disorder prediction 32 57 - -
Pvu11g0800 290 Gene3D FAS1 domain 54 214 IPR036378 -
Pvu11g0800 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 289 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0800 Pvu-Chr11 7189326 7190436 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0800 - - gmx:100792674 439.884