Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0799 ATGAGAGCGACACGTGTTCTGTTTGTTTTTCTTTGGTTCTTCTGCGTTTATTCCCCTGCTGCGTTTTGCGCAAATGTCACGTATGACCATAGAGCATTGGTCATTGACGGCAAGCGCCGAGTGTTGGTCTCTGGTTCTATTCATTATCCTCGTAGCACTCCAGAGATGTGGCCAGACCTCATTCAGAAAGCCAAAGATGGAGGACTTGATGTGATTGAGACTTATGTTTTCTGGAACTTACACGAACCAGTTCGAGGCCAGTATAATTTTGAAGGTAGGGCAGATTTGGTTAAATTTGTGAAGGCTGTAGCAGCAGCAGGTCTATACGTGCATCTCCGGATTGGTCCATACGCATGTGCTGAATGGAACTACGGTGGTTTCCCTCTTTGGCTACATTTTATTCCGGGAGTTCAGTTCCGAACTGATAACAAACCGTTCGAGGCCGAAATGAAGCGGTTCACCGCTAAGATTGTGGATATGATGAAGCAAGAAAACCTCTATGCATCACAGGGAGGACCTATTATTTTGTCTCAGGTCGAAAATGAGTATGGAAACATTGATGCGGCCTATGGTCCTGCTGCTAAATCTTACATCAAATGGGCAGCATCAATGGCAACATCTCTTGATACAGGGGTTCCTTGGGTAATGTGCCAACAGGCAGATGCTCCTGACCCAATTATTAACGCATGCAATGGATTTTACTGCGATCAATTCAATCCAAACTCTAACTCAAAACCAAAAATTTGGACTGAGAACTGGACTGGATGGTTTCTTTCATTTGGCGGTGCTGTGCCTTACAGACCAGTGGAAGATATTGCTTTTGCTGTGGCACGCTTTTACCAGCGAGGTGGAACTTTTCAGAATTACTATATGTACCATGGAGGGACTAATTTTGGCCGAAGCTCTGGTGGACCTTTCATTTCTACTAGTTATGATTATGATGCTCCAATTGACGAGTATGGAATTGTTAGGCAGCCTAAGTGGGGCCACCTTAAAGATGTGCATAAGGCCATAAAGCTTTGTGAAGAAGCACTGATAGCGACTGATCCAACCATTACAACTCCTGGACCAAATATAGAGGCTGCAGTTTACAAGACAGGATCTGCATGTGCAGCCTTCCTTGCCAACATTGCCACATCTGATGCAACAGTGACCTTTAATGGAAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTAGTGCTTAATACTGCAAAGATTAATTCTGCATCTATGATTTCAAGCTTCAGAACTGAGTCCTTAAAAGAAGAGGTTGGTTCTGGCTCAGGATGGAATTGGATTAGTGAACCCGTCGGTATTTCGAAGGCAGATTCATTCTCAAAATTTGGATTACTGGAGCAAATAAATACAACTGCTGATAAAAGTGATTATTTGTGGTACTCGTCAAGTATTGATCTTGAAGATGATGCTGATTCTCAAACTGTCCTTCACATTGAGTCCCTTGGTCATGCCCTTCATGCTTTCATAAATGGGAAGCTTGCAGGGAGTGGAACGGGAAACAGTAACAAAGCTAAGGTCGAAGTAGACATCCCCATCAAACTAGTGGCTGGGAAGAACATGATTGATCTCCTGAGTTTAACCGTGGGACTTCAGAACTATGGAGCTTTTTTTGACACATGGGGTGCGGGGATCACTGGTCCAGTGATATTGAAAGGTTTGAAGAATGGAAGCACTGTTGATCTCTCCTCCCAACAGTGGACATATCAGGTTGGCCTTAAAGGTGAAGATTTAGGTCCATCAAGTGGAAGCTCTGGACAGTGGAACTCTCAATCTGATTTACCTACAAATCAACCCTTGACTTGGTACAAGACAAACTTTGTTGCTCCCTCGGGAAGTAACCCAGTTGCTATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTGAATGGACAGAGCATTGGGCGATACTGGCCTACATATGTCTCTCCAAATGGCGGTTGTGCTGACTCCTGCAATTATAGAGGGGCCTATAGTTCATCCAAATGTCTCAAGAACTGTGGGAAACCATCACAGACATTATACCACGTACCACGATCATGGTTACAACCAGATAGCAATACACTTGTATTGTTTGAGGAAAGTGGAGGTGACCCTACGCAAATCTCTTTTGCTACAAAACAGATAGGAAGCGTGTGTTCACATGTATCTGAATCTCACCCTCCACCTGTAGACTTGTGGAATTCAGATACAAAAGCAGGGCCTGTACTGTCACTGGAGTGTCCTTATCCTAATCAGGCGATCTCTTCCATTCAATTTGCAAGTTTTGGAACGCCTTATGGAACTTGTGGGAACTTCAAACATGGACGGTGCAGAAGTAATAAGGCTCTATCCATTGTTCAGAAGGCCTGCATTGGATCAAACAGTTGTAGCGTTGGACTATCACTTGATACATTTGGAGATCCATGTAAAGGAGTAGCAAAGAGTTTAGCAGTTGAAGCTTCTTGTGCATAG 2496 0.4407 MRATRVLFVFLWFFCVYSPAAFCANVTYDHRALVIDGKRRVLVSGSIHYPRSTPEMWPDLIQKAKDGGLDVIETYVFWNLHEPVRGQYNFEGRADLVKFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGVQFRTDNKPFEAEMKRFTAKIVDMMKQENLYASQGGPIILSQVENEYGNIDAAYGPAAKSYIKWAASMATSLDTGVPWVMCQQADAPDPIINACNGFYCDQFNPNSNSKPKIWTENWTGWFLSFGGAVPYRPVEDIAFAVARFYQRGGTFQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGIVRQPKWGHLKDVHKAIKLCEEALIATDPTITTPGPNIEAAVYKTGSACAAFLANIATSDATVTFNGNSYHLPAWSVSILPDCKNVVLNTAKINSASMISSFRTESLKEEVGSGSGWNWISEPVGISKADSFSKFGLLEQINTTADKSDYLWYSSSIDLEDDADSQTVLHIESLGHALHAFINGKLAGSGTGNSNKAKVEVDIPIKLVAGKNMIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGSTVDLSSQQWTYQVGLKGEDLGPSSGSSGQWNSQSDLPTNQPLTWYKTNFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVSPNGGCADSCNYRGAYSSSKCLKNCGKPSQTLYHVPRSWLQPDSNTLVLFEESGGDPTQISFATKQIGSVCSHVSESHPPPVDLWNSDTKAGPVLSLECPYPNQAISSIQFASFGTPYGTCGNFKHGRCRSNKALSIVQKACIGSNSCSVGLSLDTFGDPCKGVAKSLAVEASCA* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0799 831 Pfam Galactose binding lectin domain 753 830 IPR000922 GO:0030246
Pvu11g0799 831 Gene3D Glycosidases 20 341 - -
Pvu11g0799 831 SUPERFAMILY (Trans)glycosidases 26 342 IPR017853 -
Pvu11g0799 831 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Pvu11g0799 831 ProSiteProfiles SUEL-type lectin domain profile. 745 831 IPR000922 GO:0030246
Pvu11g0799 831 Gene3D - 567 727 - -
Pvu11g0799 831 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 PRINTS Glycosyl hydrolase family 35 signature 611 625 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 PRINTS Glycosyl hydrolase family 35 signature 638 654 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 SUPERFAMILY Galactose-binding domain-like 579 744 IPR008979 -
Pvu11g0799 831 PANTHER BETA-GALACTOSIDASE 5 825 - -
Pvu11g0799 831 Gene3D - 742 831 IPR043159 -
Pvu11g0799 831 PANTHER BETA-GALACTOSIDASE RELATED 5 825 IPR001944 GO:0004553|GO:0005975
Pvu11g0799 831 SUPERFAMILY Galactose-binding domain-like 398 567 IPR008979 -
Pvu11g0799 831 Pfam Beta-sandwich domain in beta galactosidase 345 414 IPR041392 -
Pvu11g0799 831 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Pvu11g0799 831 Gene3D - 415 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0799 Pvu-Chr11 7180679 7187644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0799 20 688 Glycoside Hydrolase AT2G28470 76.176 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0799 - - gmx:100793198 1624.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0799 11 7180679 7187644 Pvu11g0799 11 7180679 7187644 ECH