Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0793 ATGAAACAAGCAACCCTTTTCTCCCTCTCGCTCTTTCTACTCTTTTCCTCTACCACCTTGGCTATTTCACCTGCACCTGCAGCAGCCCCAAAAGCCCCTGCAGCAAAAACTCCCCATACCCCAAAGGCTGCAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAGTCTCCAGACTCTCCTGACTCTGTCCCTGATGACATCACCAGAATCCTCAAAAAGGCCAAAATGTTCTCAACCCTGGTCCGCCTCCTCAAAACCACAGAAATCATGAACAACATCAACTCACAGCTCATAACAGCCAAGAGTGGGGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCAGGCTTCCTCAACTCCCTAAACGCAGGCCAGAAAATTGAACTTGTGCAGTTTCACATATTGCCAGAGTTTGTGTCCAGCTCAAACTTTGATTCTCTGAGCAACCCTGTGCAGACAGTGGCTGGCAAAGACCCTGCAAGGCTTCCACTGAATGTGAATGCATTAGGTAACAGTGTCAACATCTCAACTGGGGTAGTCAATGCCACCATTCTTGGAGTAGTATACGCGGATAATAAACTTGGGATTTATCACGTGGACAAGGTGCTTCTTCCTCTAGATTTCTTTGTAACCAATAAGGCTCCAGCTTTGGCTCCTTCATCTCTTGCAAAGGCCCCCAAAGCTGCTAAGGAGAACTCTTCCGAGAATGATCAAGGCGAAACAAAGCAGGATCAGAATAAATCTGGGGCAGCGAGTTTGGTTAGCATTCATGCACTGATGTCGGTTGGGATAGCTTTGATGGTAGTGGCAAACATATGGAGTTGA 846 0.474 MKQATLFSLSLFLLFSSTTLAISPAPAAAPKAPAAKTPHTPKAAAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSTLVRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNAGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATILGVVYADNKLGIYHVDKVLLPLDFFVTNKAPALAPSSLAKAPKAAKENSSENDQGETKQDQNKSGAASLVSIHALMSVGIALMVVANIWS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0793 281 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 281 IPR045003 -
Pvu11g0793 281 SUPERFAMILY FAS1 domain 49 213 IPR036378 -
Pvu11g0793 281 SMART fasc_3 108 213 IPR000782 -
Pvu11g0793 281 Pfam Fasciclin domain 78 212 IPR000782 -
Pvu11g0793 281 PANTHER FASCICLIN DOMAIN PROTEIN 4 281 - -
Pvu11g0793 281 MobiDBLite consensus disorder prediction 228 254 - -
Pvu11g0793 281 MobiDBLite consensus disorder prediction 29 66 - -
Pvu11g0793 281 ProSiteProfiles FAS1/BIgH3 domain profile. 66 210 IPR000782 -
Pvu11g0793 281 MobiDBLite consensus disorder prediction 43 60 - -
Pvu11g0793 281 Gene3D FAS1 domain 54 212 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0793 Pvu-Chr11 7141737 7142582 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0793 - - gmx:100793759 405.986