Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g0792 | ATGATGAGAAAGCAATGTGTCTTGTCCTTCTCACTGGCACTGCTACTTTCATTTTTTAATTCCACCACCACTTTGGCCCAATTATCACCAGCTTCTGCCCCTCTTAAACCAGTTCAACCTACCCCTACCCCACCAGCTGAGGCTCCTAAACAGCCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACTCCTGACACTGCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCTAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGTTCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGACTATGTTTCTAGCTCTAACTTTGATACTCTAACCAACCCAGTGAGAACCCTTGCAGGGGCTAAACCTGGAAAAGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCACAGGCATTGTATATACGGATAAGCATCTCGCTATTTACAAGGTGGGTAAGGTGCTTCTTCCTTTGGACTTTTTTACTGTTGCTAAAGCACCTGCAAAGGCTCCCTCATTGGCTCCACAACCTTCTACTGACGCAACAAAGGCGCCTAAAGCTGATAAGGACGACTCATCTTCTTCAGATTCCTCACACGTTAATCCCACCGAACAGAACTCCGGCACCGACAAGATCAATATGTACGGAAAGTTAGTGTCACTTGGACTAGGGCTTGCACTTGTGGCAACAACTATGTAA | 876 | 0.4635 | MMRKQCVLSFSLALLLSFFNSTTTLAQLSPASAPLKPVQPTPTPPAEAPKQPLVPSLPQSPSDSTPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPLDFFTVAKAPAKAPSLAPQPSTDATKAPKADKDDSSSSDSSHVNPTEQNSGTDKINMYGKLVSLGLGLALVATTM* | 292 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g0792 | 291 | Pfam | Fasciclin domain | 82 | 216 | IPR000782 | - | |
| Pvu11g0792 | 291 | Gene3D | FAS1 domain | 55 | 216 | IPR036378 | - | |
| Pvu11g0792 | 291 | MobiDBLite | consensus disorder prediction | 255 | 270 | - | - | |
| Pvu11g0792 | 291 | SMART | fasc_3 | 112 | 217 | IPR000782 | - | |
| Pvu11g0792 | 291 | MobiDBLite | consensus disorder prediction | 32 | 66 | - | - | |
| Pvu11g0792 | 291 | ProSiteProfiles | FAS1/BIgH3 domain profile. | 70 | 214 | IPR000782 | - | |
| Pvu11g0792 | 291 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 1 | 282 | - | - | |
| Pvu11g0792 | 291 | MobiDBLite | consensus disorder prediction | 35 | 56 | - | - | |
| Pvu11g0792 | 291 | MobiDBLite | consensus disorder prediction | 229 | 270 | - | - | |
| Pvu11g0792 | 291 | SUPERFAMILY | FAS1 domain | 64 | 217 | IPR036378 | - | |
| Pvu11g0792 | 291 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 1 | 282 | IPR045003 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu11g0792 | Pvu-Chr11 | 7137439 | 7138314 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu11g0792 | - | - | gmx:100795331 | 402.519 |