Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0788 CGGTTTTCACCCGATGATAAATATTCGAGGCAGAGAGTTCTTCTGAAGAAGCGTTTTGGATTGTTACCAACCCAGCAGGCACCTCTAAAGTACTGA 96 0.4479 RFSPDDKYSRQRVLLKKRFGLLPTQQAPLKY* 32
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0788 31 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 1 22 - -
Pvu11g0788 31 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 3-LIKE PROTEIN 1 31 - -
Pvu11g0788 31 SUPERFAMILY Nop10-like SnoRNP 1 25 IPR036756 GO:0001522|GO:0030515|GO:0042254
Pvu11g0788 31 Pfam Nucleolar RNA-binding protein, Nop10p family 1 19 IPR007264 GO:0001522|GO:0030515|GO:0042254
Pvu11g0788 31 PANTHER RIBOSOME BIOGENESIS PROTEIN NOP10 1 31 IPR007264 GO:0001522|GO:0030515|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0788 Pvu-Chr11 7084956 7085053 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0788 K11130 - pop:7471960 65.4698