Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0784 ATGCTTTCTCGGTTAATCCCTAAACCCTCTCACCTCCGTCGCTTCCTCTCTCTTCCGTTGAAACCGCCCCACGCACCTGCGAAACCCAACTTCACCACCTTCGTTGTTCCCAAACACTTCTCCACCAACAGCGGCGGCAGCAGTGATGGCAAGGATCCCCTATCGTCCCGTTTGTGGAACGAATTCGGGGAGACCGAGGAAAAGTACGGCGCTTTATTCGAGGCGGAGGAGGAGAGTGGAATTTCCGGAATAAACGAAGAGGGTGGGAAAAGGGAGGAGCGGGGGTGGCTGCAAGAGGAAGAACAGGGGTGGTTGCATGAGAAGGGTCTCGATGAGCAAGACGAGGATGCTATATTTAAAGGGATCGAGAAGGAAAGTGGAGATGCGGGTGGTGGAGGTGGTGCTTTTGATGGTGGGAATTCTGGAGTTCGAGCAGGAGAGGACTTCAAACCTTGGAACTTGAAGGAAGAAGACAAAGAGGATGTGTTTGCTTTCCAAGAGGAAGAGGATGTGGAACAGGAAAGGGAGATCCATGCTGTGGATGCTAAGCCTCAAGTAGATGTTGAACAGCTTGAGAAGGAAGAACAAGCTCTCACTGCTGTTGTCAAAGGCCCAAAACGTGCATTTGGTGATTTGATTGCTGCTTCTGGAATCACGGATGAAATGCTTGACAGTTTGATTGCGTTGAAAGACTTCGAGGGAGTTGATGGGTTGCCCCCTCTTAGTGTAATTGAAGACATGAGGTATGAGAGGAATACTAGAAAATCCAGTAGAGGTGAAATGGAGAGGCTGAAGCAGGAGGAAGCTGCAAAGGCTAGAGTGAAACACGTTGATGACAAAGGTCGTGCTTATGGAACAGGAAGAAGAAAATGCAGTGTTGCCCGTGTCTGGGTTCAGCCTGGTAATGGTAAATTTATAGTCAATGATAAAGAGTTTGATGTCTATTTTCCTATGCTTGATCATCGCGCTACTCTCCTTCGACCTTTCTCTGAGACAAAGACATTGGGGCTCTGGGATGTGTATTGTACCGTGAAAGGAGGTGGTGTTTCAGGGCAAGTCGGAGCTATACGATTGGGGATCAGCAAGGCTCTGCAGAACTGGGAACCAGAATTGCGGCCTTCACTGAGAAATGCTGGTTTCCTGACAAGGGACTCACGAGTGGTAGAAAGGAAAAAACCAGGAAAGGCAAAAGCAAGAAAAAGTTTCCAATGGGTCAAGCGTTGA 1224 0.4877 MLSRLIPKPSHLRRFLSLPLKPPHAPAKPNFTTFVVPKHFSTNSGGSSDGKDPLSSRLWNEFGETEEKYGALFEAEEESGISGINEEGGKREERGWLQEEEQGWLHEKGLDEQDEDAIFKGIEKESGDAGGGGGAFDGGNSGVRAGEDFKPWNLKEEDKEDVFAFQEEEDVEQEREIHAVDAKPQVDVEQLEKEEQALTAVVKGPKRAFGDLIAASGITDEMLDSLIALKDFEGVDGLPPLSVIEDMRYERNTRKSSRGEMERLKQEEAAKARVKHVDDKGRAYGTGRRKCSVARVWVQPGNGKFIVNDKEFDVYFPMLDHRATLLRPFSETKTLGLWDVYCTVKGGGVSGQVGAIRLGISKALQNWEPELRPSLRNAGFLTRDSRVVERKKPGKAKARKSFQWVKR* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0784 407 Coils Coil 406 407 - -
Pvu11g0784 407 ProSitePatterns Ribosomal protein S9 signature. 346 364 IPR020574 GO:0003735|GO:0005840|GO:0006412
Pvu11g0784 407 PANTHER 28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL 150 407 - -
Pvu11g0784 407 Hamap 30S ribosomal protein S9 [rpsI]. 278 407 IPR023035 -
Pvu11g0784 407 PANTHER RIBOSOMAL PROTEIN S9 150 407 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pvu11g0784 407 Gene3D - 275 407 IPR014721 -
Pvu11g0784 407 Pfam Ribosomal protein S9/S16 287 407 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pvu11g0784 407 SUPERFAMILY Ribosomal protein S5 domain 2-like 282 407 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0784 Pvu-Chr11 7043506 7046595 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0784 K02996 - gmx:100797241 624.394