Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0781 ATGGTGAAAAAGCAATTTGGTTTGTCCTTCTCACTAGCACTGCTACTTTCATTCTTGTACTCCACCACCACTTTAGGCCAATTATCTCCAACTTCTGCCCCTCTCAAACCACCACAACCTACCCCTACCCCACCAACTGAGGCTCCTAAACAACCATTGGTTCCCTCACTGCCACAGTCACCAAGTGATTCCACCCCTGACACTGCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCCGGTGGCATCACCATTCTTGCACCTGATGACAGTTCCTTCTCTGAACTGAAAGCAGGCTTCCTCAACTCTCTTTCTGACAGCCAAAAGCTGGAGCTCTTACAGTTCCATGTTCTTTCTGACTATGTGTCTAGCTCCAACTTCGATACTCTAACCAACCCAGTGAGAACACTTGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCACAGGCATTGTATACACAGATAAACATCTCGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCTATGGACTTCTTTGCAGTGGCCAAGGCACCAGCAAAGGGACCATCTTTGGCACCAGAACCTTCTGCAAAGGCTCCTAAAGCGGATAAGGAGAAGCCAGTGTCTCCAGATTCCTCAGAATCATCTGATATTAATTCCACGAACGACAACTCCGGCACTGTGAAAATCAACTTACAAGGAAAGTGGGTGTCCCATGTTCTTGGAGTACTTCTTGTGCTTACATTGTCATCATGA 879 0.4699 MVKKQFGLSFSLALLLSFLYSTTTLGQLSPTSAPLKPPQPTPTPPTEAPKQPLVPSLPQSPSDSTPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDSQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFAVAKAPAKGPSLAPEPSAKAPKADKEKPVSPDSSESSDINSTNDNSGTVKINLQGKWVSHVLGVLLVLTLSS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0781 292 MobiDBLite consensus disorder prediction 33 56 - -
Pvu11g0781 292 Pfam Fasciclin domain 82 216 IPR000782 -
Pvu11g0781 292 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
Pvu11g0781 292 SMART fasc_3 112 217 IPR000782 -
Pvu11g0781 292 MobiDBLite consensus disorder prediction 228 265 - -
Pvu11g0781 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 280 IPR045003 -
Pvu11g0781 292 MobiDBLite consensus disorder prediction 29 66 - -
Pvu11g0781 292 Gene3D FAS1 domain 55 216 IPR036378 -
Pvu11g0781 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 280 - -
Pvu11g0781 292 SUPERFAMILY FAS1 domain 64 217 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0781 Pvu-Chr11 7025236 7026114 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0781 - - gmx:100776667 408.683