Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0780 ATGAGAGCATCACAGACTCTGTTCCTTTTGCTTTGGTTCTTCTGCATTTATGCCCCTACTTCGTTTTCCACAAATGTCACGTACGACCATAGAGCATTGGTCATTAATGGCAAGCGCCGAGTTTTGGTCTCTGGTTCTATCCATTACCCTCGTAGCACTCCAGAGATGTGGCCAGACATCATTCAAAAGTCCAAAGATGGAGGACTTGATGTGATTGAGACTTATGTTTTCTGGAACTTACACGAACCAGTTCGAGGCCAGTATAATTTTGAAGGTAGGGCAGATTTGGTTAAATTTTTGAAGACAGTAGCAGCAGCAGGCCTATATGTGCATCTACGGATTGGTCCATACGCATGTGCTGAATGGAACTACGGTGGTTTCCCTCTTTGGCTACATTTTATTCCGGGAATTCAGTTCCGAACTGATAACAAACCATTTGAGGAAGAAATGAAGCGGTTCACCGCTAAGATTGTGGATATGATGAAGCAAGAGAACCTCTATATGTCATACGGAGGACCTATTATTTTGTCTCAGATAGAAAATGAGTATGGGAACATTGATGATCATTATGGTCCAGCTGCTAAATCCTACATCAAATGGGCAGCATCAATGGCAACATCTCTTGATACAGGGGTTCCCTGGGTAATGTGCCAACAGCTAGATGCTCCTGATCCAATTCTAAAAATATGGACTGAGGGTTATACTGGATGGTTTCTTGCATTTGGCGATGCTGTACCTCACAGACCTGTGGAAGATCTTGCTCTTGCATTTGGCGATGCTTACCATGGAGGGACGAACTTTGGCCGGGCTTCTGGTGGGCCTTTCGTTGCTAGTAGTTATGACTATGATGCACCAATTGATGAGTATGGAATTCTTAGACAGCCTAAGTGGGGCCACCTTAAAGACTTGCATAAGGCCATAAAACTTTGTGAAGAAGCTCTCACAGCTACTGATCCAACAATTACATCTCTTGGACCAAATATAGAGGTTGCAGTTTACAAGACAGGAGCTGTATGTTCCGCTTTCCTTGCCAACATAGCCACATCTGATGCAAAAGTGACCTTCAATGGAAATCCATATCACCTGCCCGCATGGCCTGTCAGCATCTTACCAGACTGCAAGAATGTAGTGCTTAATACTGCAAAGATTAATTCTGCATCTATGATTTCAAGCTTTACAAGTGAATCTTTAAAAGAAGAGGTTGGCTCGTTGGATGATTCTGACTCAGGCGGATGGAGTTGGATTAGTGAACCTATCGGTATTTCAAAGGCTGATTCATTCTCAAAATTTGGGTTACTGGAGCAAATAAATACAACAGCTGACAGAAGTGACTACTTGTGGTACTCCACAAGAATTGATCTTGATACTGGTGCTCAAACTGTCCTTCACATTAAATCCCTTGGTCAAGCTCTTCATGCTTTCATAAATGGGAAACTTGCAGGGAGTGGAATTGGCAACCATGAGAAAGCTAAGGTCAAAGTAGACATCCCCATCACACTACTGGCTGGGAAGAACACAATTGATCTTCTAAGTTTAACTGTGGGACTTCAGAACTATGGAGCTTTTTTTGACACATGGGGTGCAGGGATCACTGGCCCTGTGATATTGAAAGGTTTGAAAAATGGCAGCTCTCTTGATCTGTCCTCCCAGAAGTGGACATATCAGATTGGCCTTAAAGATGAAGATTTAGGTCCATCTGGTGGCAGTTCTGGACAGTGGAATTCACAATCTACCCTACCTGTACACCAACCGTTGATTTGGTACAAGACAAATTTCCTTGCTCCCTCTGGTAGCAATCCAGTTGCAATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTGAATGGACAGAGCATTGGGCGATACTGGCCTACGTATGCCTCTCCAAGTAGTGGTTGTACTGATTCGTGCAATTATAGAGGGTCCTATCAAGCATCCAAATGTCTCCAAAACTGTGGAAAGCCATCACAGACATTATACCATGTACCACGATCATGGCTACGACCTAAAAGCAACACACTTGTTTTGTTTGAGGAAAGTGGAGGCAACCCTAAGCAAATCACTTTTGCTACAAAACAGATGGGAAGCGTGTGTTCACATGTATCTGAATCTCACCCTCCACCTGTAGACTTGTGGAATTCAGATGCAGAATCAGGAAGAAAAGTAGGGCCTGTAATGTTACTGGAGTGCCCTTATCCTAATCAAGTGATCTCTTCCATTAAATTTGCTAGTTTTGGAACACCTCAGGGGACTTGTGGGAACTTCAAACATGGACGCTGCAGCAGCAATAAGGCTCTATCCATTGTGCAGAAGGGCTGCATTGGATCAAGCAGTTGTAGAATTGGATTATCAATTAATACATTCGGAGATCCATGTAAAGGAGTACCAAAGAGTTTAGCTGTTGAAGCTTCTTGTTCATAA 2424 0.4344 MRASQTLFLLLWFFCIYAPTSFSTNVTYDHRALVINGKRRVLVSGSIHYPRSTPEMWPDIIQKSKDGGLDVIETYVFWNLHEPVRGQYNFEGRADLVKFLKTVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTDNKPFEEEMKRFTAKIVDMMKQENLYMSYGGPIILSQIENEYGNIDDHYGPAAKSYIKWAASMATSLDTGVPWVMCQQLDAPDPILKIWTEGYTGWFLAFGDAVPHRPVEDLALAFGDAYHGGTNFGRASGGPFVASSYDYDAPIDEYGILRQPKWGHLKDLHKAIKLCEEALTATDPTITSLGPNIEVAVYKTGAVCSAFLANIATSDAKVTFNGNPYHLPAWPVSILPDCKNVVLNTAKINSASMISSFTSESLKEEVGSLDDSDSGGWSWISEPIGISKADSFSKFGLLEQINTTADRSDYLWYSTRIDLDTGAQTVLHIKSLGQALHAFINGKLAGSGIGNHEKAKVKVDIPITLLAGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGSSLDLSSQKWTYQIGLKDEDLGPSGGSSGQWNSQSTLPVHQPLIWYKTNFLAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYASPSSGCTDSCNYRGSYQASKCLQNCGKPSQTLYHVPRSWLRPKSNTLVLFEESGGNPKQITFATKQMGSVCSHVSESHPPPVDLWNSDAESGRKVGPVMLLECPYPNQVISSIKFASFGTPQGTCGNFKHGRCSSNKALSIVQKGCIGSSSCRIGLSINTFGDPCKGVPKSLAVEASCS* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0780 807 Pfam Glycosyl hydrolases family 35 229 306 IPR031330 -
Pvu11g0780 807 Pfam Glycosyl hydrolases family 35 33 224 IPR031330 -
Pvu11g0780 807 SUPERFAMILY Galactose-binding domain-like 367 539 IPR008979 -
Pvu11g0780 807 Pfam Galactose binding lectin domain 729 806 IPR000922 GO:0030246
Pvu11g0780 807 SUPERFAMILY (Trans)glycosidases 24 311 IPR017853 -
Pvu11g0780 807 ProSiteProfiles SUEL-type lectin domain profile. 721 807 IPR000922 GO:0030246
Pvu11g0780 807 Gene3D - 722 807 IPR043159 -
Pvu11g0780 807 PANTHER BETA-GALACTOSIDASE 5 800 - -
Pvu11g0780 807 PANTHER BETA-GALACTOSIDASE RELATED 5 800 IPR001944 GO:0004553|GO:0005975
Pvu11g0780 807 SUPERFAMILY Galactose-binding domain-like 551 715 IPR008979 -
Pvu11g0780 807 Gene3D - 421 551 - -
Pvu11g0780 807 Gene3D Glycosidases 20 310 - -
Pvu11g0780 807 Pfam Beta-sandwich domain in beta galactosidase 317 383 IPR041392 -
Pvu11g0780 807 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Pvu11g0780 807 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Pvu11g0780 807 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Pvu11g0780 807 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Pvu11g0780 807 PRINTS Glycosyl hydrolase family 35 signature 583 597 IPR001944 GO:0004553|GO:0005975
Pvu11g0780 807 PRINTS Glycosyl hydrolase family 35 signature 610 626 IPR001944 GO:0004553|GO:0005975
Pvu11g0780 807 Gene3D - 552 634 - -
Pvu11g0780 807 Gene3D - 648 702 - -
Pvu11g0780 807 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0780 Pvu-Chr11 7016263 7021996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0780 23 660 Glycoside Hydrolase AT2G28470 69.617 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0780 - - pvu:PHAVU_011G075900g 1657.5