Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0777 ATGGACGACGTTTGCGAGGGGAAGGACTTCACATTCTCGAAGCAGGAGGAGAAGATTCTAGAACTCTGGTCTCAAATCGATGCATTCAACACTCAGTTAGCTCTCACCAAGGACAAGCCGGAGTACATCTTCTACGATGGCCCTCCCTTCGCCACCGGCCTCCCTCACTACGGCCACATCCTCGCCGGCACAATCAAGGACATCGTCACGCGCTACCAGTCCATGACCGGCCACCACGTCACGCGCCGATTCGGCTGGGACTGCCACGGCCTCCCCGTCGAGAACGAGATTGACAAGAAGCTCGGCATCAAGAAACGGGAGGACGTCCTCAAACTCGGAATCGACAAGTACAACGAGGAGTGCCGCAGCATCGTCACGCGCTACGTTTCTGAGTGGGAGAGCGTCATCACGCGCACCGGTCGCTGGATCGACTTCAAGAATGATTACAAGACAATGGACCTCAAGTTCATGGAGTCCGTGTGGTGGGTTTTCTCTCAGTTGTACGCCAAAAACCTTGTATATAAAGGTTTCAAGGTCATGCCATACAGCACCGGCTGCAAAACTCCGCTCTCTAATTTTGAGGCTGGGCAGAACTATAAGGATGTATCTGATCCTGAAGTATTCATGACGTTTCCTGTCGTGGGTGATCAGCATGGTGCATCTTTTGTAGCATGGACTACAACTCCATGGACTCTTCCTAGCAATCTTGCTCTGTGTATCAATGCCAATTTTACATATGTGAAGGTTCGCAATAAGTACTCTGGTAAAGTTTATATTGTTGCTCAATCTCGTCTGTCTGCAATCAATAACCCTAAGGAGAAACCCAAAGAAGCTGTTGTTAATAGTTCAAATGACGTTTCTAAGAATAAAAATGCCAAGACCAAGGGAGCTTCAGGTGGAAAAACGGAAAATGTTTTAGATTCTTTTGAAGTACTGGAGAAATTTTCAGGGGCATCATTAGTGGGGACAAAGTATGAACCGTTATTTGATTACTTCAAGGAGTTATCTGATACAGCTTTTAGAGTTGTTGCCGACAATTATGTTACTGATGATAGTGGTACTGGTGTTGTCCATTGCGCCCCTGCTTTTGGTGAAGATGATTTCCGTGTTTGCATTGATAATAAAATCCTTAGCAAGGTTTGTTCTTTTAAGAACATGAAGTTATATGAGGATTGTTTTTTATTTTCCCTCATCAAATGCTAG 1203 0.4597 MDDVCEGKDFTFSKQEEKILELWSQIDAFNTQLALTKDKPEYIFYDGPPFATGLPHYGHILAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVENEIDKKLGIKKREDVLKLGIDKYNEECRSIVTRYVSEWESVITRTGRWIDFKNDYKTMDLKFMESVWWVFSQLYAKNLVYKGFKVMPYSTGCKTPLSNFEAGQNYKDVSDPEVFMTFPVVGDQHGASFVAWTTTPWTLPSNLALCINANFTYVKVRNKYSGKVYIVAQSRLSAINNPKEKPKEAVVNSSNDVSKNKNAKTKGASGGKTENVLDSFEVLEKFSGASLVGTKYEPLFDYFKELSDTAFRVVADNYVTDDSGTGVVHCAPAFGEDDFRVCIDNKILSKVCSFKNMKLYEDCFLFSLIKC* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0777 400 PANTHER BNAUNNG00270D PROTEIN 1 380 - -
Pvu11g0777 400 SUPERFAMILY Nucleotidylyl transferase 10 199 - -
Pvu11g0777 400 Gene3D - 208 396 IPR009008 GO:0002161|GO:0006418
Pvu11g0777 400 Gene3D HUPs 4 207 IPR014729 -
Pvu11g0777 400 PANTHER SOLEUCYL-TRNA SYNTHETASE 1 380 IPR023586 GO:0004822
Pvu11g0777 400 MobiDBLite consensus disorder prediction 276 298 - -
Pvu11g0777 400 Pfam tRNA synthetases class I (I, L, M and V) 308 377 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu11g0777 400 Pfam tRNA synthetases class I (I, L, M and V) 18 274 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu11g0777 400 MobiDBLite consensus disorder prediction 272 300 - -
Pvu11g0777 400 PRINTS Isoleucyl-tRNA synthetase signature 42 53 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Pvu11g0777 400 PRINTS Isoleucyl-tRNA synthetase signature 223 246 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Pvu11g0777 400 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 207 376 IPR009008 GO:0002161|GO:0006418
Pvu11g0777 400 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 49 60 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0777 Pvu-Chr11 6971820 6974216 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0777 K01870 - pvu:PHAVU_011G075600g 827.78