Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0770 ATGCCCCTACTTCGTTTTCCACAAATAAGAGCATTGGTCATTAATGGCAAGCGCCGAGTTTTGGTCTCTGGTTCTATCCATTACCCTCGTAGCACTCCAGAGATGTGGCCAGACATCATTCAAAAGTCCAAAGATGGAGGACTTGATGTGATTGAGACTTATGTTTTCTGGAACTTACACGAACCAGTTCGAGGCCAGTATAATTTTGAAGGTAGGGCAGATTTGGTTAAATTTGTGAAGACAGTAGCAGCAGCAGGCCTATATGTGCATCTACGGATTGGTCCATACGCATGTGCTGAATGGAACTACGGTGGTTTCCCTCTTTGGCTACATTTTATTCCGGGAATTCAGTTCCGAACTGATAACAAACCATTTGAGGAAGAAATGAAGCGGTTCACCGCTAAGATTGTGGATATGATGAAGCAAGAGAACCTCTATATGTCACAGGGAGGACCTATTATTTTGTCTCAGATAGAAAATGAGTATGGGAACATTGATGATCATTATGGTCCAGCTGCTAAATCCTACATCAAATGGGCAGCATCAATGGCAACATCTCTTGATACAGGGGTTCCTTGGGTAATGTGCCAACAGCTAGATGCCCCTAATCCAATTATTAACACGTGCAATGGATTTTACTGTGACCAATTCCAACCAAATTCTAATGCAAAACCAAAAATATGGACAGAGGGTTATACTGGATGGTTTCTTGCATTTGGGGATGCTGTACCTCACAGACCTGTGGAAGATCTTGCATTTGCTGTAGCACGCTTTTTCCAAAGAGGTGGAACTTTTAACAATTACTATATGTACCATGGAGGGACGAACTTTGGCCGGGCTTCTGGTGGGCCTTTCGTTGCTAGTAGTTATGACTATGATGCACCAATTGATGAGTATGGAATTCTTAGACAGCCTAAGTGGGGCCACCTTAAAGACTTGCATAAGGCCATTAAACTTTATGAAGAAGCTCTCACAGCTACTGATCCAACAATTACATCTCTTGGACCAAATATAGAGGTTGCAGTTTACAAGACAGGAGCTGTATGTTCCGCTTTCCTTGCCAACATAGCCACATCTGATGCAAAAGTGACCTTCAATGGAAATCCATATCACCTGCCCGCATGGTCTGTCAGCATCTTACCTGACTGCAAGAATGTAGTGCTTAATACTGCAAAGATTAATTCTGCATCTATGATTTCAAGCTTTACAAGTGAATCTTTAAAAGAAGAGGTTGGCTCGTTGGATGATTCTGACTCAGGAGGATGGAGTTGGATTAGTGAACCTATCGGTATTTCAAAGGCTGATTCATTCTCAAAATTTGGGTTACTGGAGCAAATAAATACAACAGCTGATAGAAGTGACTACTTGTGGTACTCCACAAGAATTGATCTTGATACTGGTGCTCAAACTGTCCTTCACATTAAATCCCTTGGTCATGCTCTTCATGCTTTCATAAATGGGAAACTTGCAGGGAGTGGAATGGGCAACCATGAGAAAGCTAACGTCAAAGTAGACATCCCCATCACACTACTGGCTGGGAAGAACACAATTGATCTTCTAAGTTTAACTGTGGGACTTCAGAACTATGGAGCTTTTTTTGACACATGGGGTGCAGGGATCACTGGCCCTGTGATATTGAAAGGTTTGAAAAATGGCAGCTCTCTTGATCTGTCCTCCCAGAAGTGGACATATCAGATTGGCCTTAAAGATGAAGATTTAGGTCCATCTGGTGGCAGTTCTAGACAGTGGAATTCACAATCTACACTACCTGTACACCAACCGTTGATTTGGTACAAGACAAATTTCCTTGCTCCCTCTGGTGGCAATCCAGTTGCAATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTGAATGGACAGAGCATTGGGCGATACTGGCCTACGTATGCCTCTCCAAGTAGTGGCTGTACTGATTCGTGCAATTATAGAGGGTCCTATCAAGCATCCAAATGTCTCCAGAACTGTGGAAAGCCATCACAGACATTATACCATGTACCACGATCATGGTTACGACCTAAAAGCAACACACTTGTTTTGTTTGAGGAAAGTGGAGGCAACCCTAAGCAAATCACTTTTGCTACAAAACAGATGGGAAGCATGTGTTCACATGTATCTGAATCTCACCCTCCACCTGTAGACTTATGGAATTCAGATGCAGAATCAGGAAGAAAAGTAGGGCCTGTAATGTTACTGGAGTGCCCTTATCCTAATCAGGTGATCTCTTCCGTTAAATTTGCTAGTTTTGGAACACCTCAGGGGACTTGTGGGAACTTCAAACATGGACGCTGCAGCAGCAATAAGGCTCTATCCATTGTGCAGAAGGGCTGCATTGGATCAAGCAGTTGTAGAATTGGGTTATCAATTAATACATTCGGAGATCCATGTAAAGGAGTACCAAAGAGTTTAGCTGTTGAAGCTTCTTGTTCATAA 2454 0.4295 MPLLRFPQIRALVINGKRRVLVSGSIHYPRSTPEMWPDIIQKSKDGGLDVIETYVFWNLHEPVRGQYNFEGRADLVKFVKTVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTDNKPFEEEMKRFTAKIVDMMKQENLYMSQGGPIILSQIENEYGNIDDHYGPAAKSYIKWAASMATSLDTGVPWVMCQQLDAPNPIINTCNGFYCDQFQPNSNAKPKIWTEGYTGWFLAFGDAVPHRPVEDLAFAVARFFQRGGTFNNYYMYHGGTNFGRASGGPFVASSYDYDAPIDEYGILRQPKWGHLKDLHKAIKLYEEALTATDPTITSLGPNIEVAVYKTGAVCSAFLANIATSDAKVTFNGNPYHLPAWSVSILPDCKNVVLNTAKINSASMISSFTSESLKEEVGSLDDSDSGGWSWISEPIGISKADSFSKFGLLEQINTTADRSDYLWYSTRIDLDTGAQTVLHIKSLGHALHAFINGKLAGSGMGNHEKANVKVDIPITLLAGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGSSLDLSSQKWTYQIGLKDEDLGPSGGSSRQWNSQSTLPVHQPLIWYKTNFLAPSGGNPVAIDFTGMGKGEAWVNGQSIGRYWPTYASPSSGCTDSCNYRGSYQASKCLQNCGKPSQTLYHVPRSWLRPKSNTLVLFEESGGNPKQITFATKQMGSMCSHVSESHPPPVDLWNSDAESGRKVGPVMLLECPYPNQVISSVKFASFGTPQGTCGNFKHGRCSSNKALSIVQKGCIGSSSCRIGLSINTFGDPCKGVPKSLAVEASCS* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0770 817 Pfam Glycosyl hydrolases family 35 12 316 IPR031330 -
Pvu11g0770 817 Gene3D Glycosidases 8 320 - -
Pvu11g0770 817 ProSiteProfiles SUEL-type lectin domain profile. 731 817 IPR000922 GO:0030246
Pvu11g0770 817 Pfam Galactose binding lectin domain 739 816 IPR000922 GO:0030246
Pvu11g0770 817 PANTHER BETA-GALACTOSIDASE 10 810 - -
Pvu11g0770 817 PANTHER BETA-GALACTOSIDASE RELATED 10 810 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 Gene3D - 732 817 IPR043159 -
Pvu11g0770 817 SUPERFAMILY Galactose-binding domain-like 377 549 IPR008979 -
Pvu11g0770 817 SUPERFAMILY Galactose-binding domain-like 561 725 IPR008979 -
Pvu11g0770 817 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 150 162 IPR019801 GO:0004553|GO:0005975
Pvu11g0770 817 Pfam Beta-sandwich domain in beta galactosidase 327 393 IPR041392 -
Pvu11g0770 817 Gene3D - 561 644 - -
Pvu11g0770 817 Gene3D - 658 712 - -
Pvu11g0770 817 PRINTS Glycosyl hydrolase family 35 signature 15 32 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 PRINTS Glycosyl hydrolase family 35 signature 36 54 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 PRINTS Glycosyl hydrolase family 35 signature 91 110 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 PRINTS Glycosyl hydrolase family 35 signature 148 163 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 PRINTS Glycosyl hydrolase family 35 signature 227 242 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 PRINTS Glycosyl hydrolase family 35 signature 264 279 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 PRINTS Glycosyl hydrolase family 35 signature 284 300 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 PRINTS Glycosyl hydrolase family 35 signature 593 607 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 PRINTS Glycosyl hydrolase family 35 signature 620 636 IPR001944 GO:0004553|GO:0005975
Pvu11g0770 817 Gene3D - 431 560 - -
Pvu11g0770 817 SUPERFAMILY (Trans)glycosidases 10 320 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0770 Pvu-Chr11 6839515 6845520 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0770 10 670 Glycoside Hydrolase AT2G28470 74.179 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0770 - - pvu:PHAVU_011G075900g 1547.33