Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0760 ATGGATACTGATGCCATTGGAGATATTGTTGACAAGCTCAAGGCTATGCAGAATGACAATGTAGAAGATCAAGATGAATATGATGATGTTGATGAGGATGATGAAGAAGAAGAACATGAACCCATCACACTTGGTTTCTTTGACAAGCCAAAGAATAAATGGTCTCTTCAACGTCAATATTTCCCAAGCAAAGCTGGAGGAGTCCCGGCTTGGCTTGACCCTTTGAATATACCATCAGGGGGATCATTTGTGTGTGACATTTGTGGAGACCCTTTACAATTCTTGCTTCAGGTTTATGCACCAACTGAGAAGGAAACGGCATTTCACCGAATGTTGTTTGTTTTTATGTGTCCTTCTATGAAATGCCTCCTCAGGGATCAACATGAGCAATGGAAACACCATCCAGAGAAGCCATCTAGAAGTGTGAAGGTCTTCCGTTGTCAATTACCATGTGTTAATCCATTTTACTCCCAAGAATGCCCTCAGAATAATGAGAGTCACAAACCTGCTGGCTGTGGAGCTGTTCTTTGTGATTGGTGTGGCACTTGGAAAGGAGACAAGGTTTGTAGTAGTTGCAAACAAGCACGGTATTGCTCTGAGAAACACCAGGTTATGAGTTGGCGCGCAGGGCATAAAATTGCTTGCCCTCAGATGCAAATTTCTTCGCCTGTTTCTGGATCCAACAAAAGTGAAACCACCTTGTTCGAGTCACAAAAAGTTGGAAGCAAGAATCTGTGGCCTGAATTTGAGATCATCATTGAAGATGAAAGTGAAGATAATAGAGACACGTCTGAGGAAAATACCTTATCTAATTCCTTGATCTCAAGGACCAGGGCTGACGACACAATGAATTCAATTTTTGATAGCTTTCAGGGTGACGCTGACAAAAAGAGTTGGGCCTCTTTCCAGGAATGCATCGACAATGCCCCTGAACAAGTGCTAAGGTATTATAGGAATACTAATGCTAAGCCAATATGGCCTGTTTCAAGTGGTCGACCATCAAATGCTGACATCCCTAGATGTAGTTACTGCAGCGGACCTATGTCTTGTGAATTTCAGATTTTGCCACAGCTGCTTTATTACTTCGGCGTTGACAATGAAGTGGACTCACTGGATTGGGCTTCAATTGTGGTGTATGCATGTGAAGCCTCTTGCGATGCAAGTTTGCCTTACAAACATGAATTTGCTTGGGTACAAATTTATTCACCTTCCACAGCCTTATAG 1224 0.4257 MDTDAIGDIVDKLKAMQNDNVEDQDEYDDVDEDDEEEEHEPITLGFFDKPKNKWSLQRQYFPSKAGGVPAWLDPLNIPSGGSFVCDICGDPLQFLLQVYAPTEKETAFHRMLFVFMCPSMKCLLRDQHEQWKHHPEKPSRSVKVFRCQLPCVNPFYSQECPQNNESHKPAGCGAVLCDWCGTWKGDKVCSSCKQARYCSEKHQVMSWRAGHKIACPQMQISSPVSGSNKSETTLFESQKVGSKNLWPEFEIIIEDESEDNRDTSEENTLSNSLISRTRADDTMNSIFDSFQGDADKKSWASFQECIDNAPEQVLRYYRNTNAKPIWPVSSGRPSNADIPRCSYCSGPMSCEFQILPQLLYYFGVDNEVDSLDWASIVVYACEASCDASLPYKHEFAWVQIYSPSTAL* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0760 407 Gene3D - 176 223 - -
Pvu11g0760 407 MobiDBLite consensus disorder prediction 14 40 - -
Pvu11g0760 407 Coils Coil 13 33 - -
Pvu11g0760 407 Pfam Programmed cell death protein 2, C-terminal putative domain 297 399 IPR007320 GO:0005737
Pvu11g0760 407 MobiDBLite consensus disorder prediction 22 40 - -
Pvu11g0760 407 ProSiteProfiles Zinc finger MYND-type profile. 177 215 IPR002893 -
Pvu11g0760 407 Pfam MYND finger 177 215 IPR002893 -
Pvu11g0760 407 PANTHER PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED 17 402 - -
Pvu11g0760 407 SUPERFAMILY HIT/MYND zinc finger-like 174 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0760 Pvu-Chr11 6724912 6729311 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0760 K14801 - gmx:100818325 694.886