LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu11g0744	ATGTCGGCACAGCAGAGATTTTTCTGCACTCTCTCCCACGCTTACCCTCTGTCTTCCTCTCTCTCCACCTTCAAATCTAGAACCTTCCTCTTTCTTCCCTTTCTTCGCTCTTACCTCACCCTAACTCCTTTGCTCTCACCAATGCCTCGCAATCAGCGAAGTGGCGCGCACGTGGAGCGGCGATGGAAGGAGAAAGCGAAAACCGAGGCGCAGTTGCCGGCTACGGGTGACGCAACTGCTGCGGAAACTGTTACTAGTAAGCTTGCAGGATTGAGTATTGGTGAGAGCGGTGGGAAAACCGGAGCGCAAGGTTCGGTTTGGAAACCTAAATCTTATGGAACTGCGAGTGGAGGCGCTGTTACTGAGATTGAAAATGGAGCTGGAGTTGAGGCAAGTGTGGCTTCGACGCAAAAGAATGGTGGAAGTGGTTTGAGTAAGATATTTCGAGATAATCTGATAGAGAAATTCACTGTGGACAAGTCCACGTACGCACGTGCACAAGTCAGAGCTACTTTCTATCCGAAATTTGAAAATGAAAAGTCGGATCAAGAGGTCCGGACCAGGATGACTGAGTTGGTAGCAAAAGGGTTGGCTACCTTAGAGGTTTCACTTAAACACTCTGGATCTCTTTTTATGTATGCGGGTCATGAGGGTGGAGCTTATGCAAAAAACAGTTTCGGAAATATATATACTGCTGTTGGTGTATTTGTTCTTGGACGGATGTTTCGTGAGGCATGGGGAACTGAAGCTTCAAAACAGCAGGCTGAATTTAATAATTTTCTTGAGAGAAACCACATGTGCATATCAATGGAACTAGTAACTGCTGTTCTTGGAGACCATGGACAGCGTCCCCAAGAAGATTATGCGGTAGTTACGGCAGTTACTGAACTGGGCAATGGAAAGCCAAAGTTCTATTCAACTCCAGAGATAATAGCTTTCTGTCGAAAATGGCGCCTTCCAACAAATCATGTGTGGTTGTTTTCAACAAGAAAATCAGCCGCTTCTTTCTTTGCTGCGTTTGATGCCTTATGCGAGGAGGGTACTGCAACGTCTGTATGCAAGGCTCTTGATGAAATTGCTGAGATCTCTGTACCAGGTTCAAAAGACCATGTAAAGGCCCAAGGTGAAATTTTAGAAGGTCTTGTGGCTCGTCTTGTAAGTCACGATAGTTCAATCCATATAGAGAAAACTTTGAAAGAATTTCCTCCTCCACATGCTGATGGAGTGGCCCTTGATTTTGGACCAAGTCTAAGGGAAATATGTGCAGCAAATAGAAATGATGAAAAACAGCAAATAAAAGCACTTCTCGAGAGTGTTGGTAGTTCGTTTTGTCCTAGCCAGTCAGATTGGTTTGGGACTGATGGTGCTGATTATCATTCAAGAAATGTGGACAGATCTGTTCTTTCAAAGTTTTTACAAGCCCATCCTGCAGACTATTCGACTAAAAAGTTGCAGGAAGTTGTTCGGTTGATGAGGGAAAAACGCTACCCTGCTGCATTCAAATGTTATCATAACTTCCACAAGGTTGATGCCATGTCAAGTGACAATATTTTCTATAAAATGGTCATTCATGTACACAGTGATTCTGGTTTTCGACGATACCAGAAAGATATGAGGCTTAAACCAGGATTATGGCCATTATATCGAGGTTTTTTTGTTGACATAAATTTATTTTCGGCAAACAAGGAGACAGCTGCTGAAATTTCTAGTAACAGTGTAAATGAAACTGGTAGCTACAGCTCTGGGGAAGATGACTTTGCTGATGAAGATGCAAATTTAATGGTCAAATTGAAATTTCTTACATATAAGTTGCGAACCTTTCTCATTCGAAATGGCCTGTCAATTCTATTCAAAGAAGGTCCAGCTGCTTACAAGGCTTATTACCTCAGACAAATGAAAATTTGGGGAACCTCTCCGGCAAAGCAGAGAGAACTTAGCAAGATGCTTGATGAATGGGCTGTGTATATACGAAGGAAGTGTGGAAATAAGCAACTGTCATCATCAACATATCTAAGTGAAGCGGAACCTTTTCTTGAACAGTTTGCAAAACGTAGTCCACAGAACCAAGTTCTGATAGGTTCTGCTGGTAATTTAGTTAGAACTGAAGATTTCTTGGCTATTGTTGAGGGAGGCCAGGATGAAGAAGGTGATCTTGTGGCAGAGCGTGAGATAGCACTGCCAGGGCCTAATATCTCAGTCAAAGACACAGTTCCAAAACATGGAGGGTTAATTGTGTTCTTTCCTGGAATACCTGGTTGTGCTAAGTCCTCCCTTTGCAAAGAATTGCTAAATGCCGAAGGAGGACTAGAAGATGGTCGACCAGTTCATAGTCTCATGGGTGACTTGATTAAAGGAAAATATTGGCAGAAAGTGGCTGCAGAGTGTAAAAAGAAACCAAATTCAATAATGCTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAAATTGATAGAAGATATGTGTCACAAAACCAGGGCATCTGCTGTACCGGTTGTAGCTGAATCTGAAGGAACTGATTCAAATCCATTTTCTCTTGATTCATTAGCTATTTTCATGTTTCGTGTGCTTCAACGAGTCAATCATCCGGGAAATCTTGACAAAGCATCTCCAAATGCTGGCTATGTGCTGCTAATGTTTTATTATCTTTACCAGGGCAGGAGCCGTAAAGAATTTGAGGGTGATTTAATTGAACGTTTTGGGTCACTTGTCAAGATGCCACTACTGAAATCTGATAGGAATCCCCTTCCTGAGCCAGTGCAGTCCATTTTGGAGGAAGGAATTGATTTATATAAACTTCACACTATAAGACATGGAAGATTAGAGTCTACCAAAGGATCCTACGCAAAAGAATGGATAAAATGGGAGAAAGAGTTACGGGATATTTTATGCGGAAATGCTGAGTATTTTAATTCTATTCAGGTTCCATTTGAGTTTGCTGTCAAGCAGGTGTTCGAACAGTTGAGAAACATTGCTAACGGACATTACACACCACCAGATACTGAAATAAGGAAATTTGGTACCATTGTTTTTGCTGCTCTCACCATGCCAGTTACTGAAATTAAAAGCGCCCTCAATAAATTGGCCGAGAGTAATCCCAAGATTGACGCATTCCTTAAAGACAAACATCTCGAGAACCTTAATCGAGCTCATTTGACTCTTGCCCACAAGAGAAGTCACGGCATCAAAGCCGTAGCTGATTATGGTATCCATCTTAATCAAAAGGTTCCGGTGGAGTTGACAGCACTACTCTTCTCAGATAAAATGGCTGCATTCGAAGCTTGTCCCGGCTCAGTGGAAGGTGAGAAGATAGTTTCAAAAAATCCATGGCCTCATATAACCTTATGGACTGCTGAAGGTGTTGGAGCCAAGGAGGCCAACATGCTACCACAGTTGCTTGCAGAGGGGAAAGCAAAACGAATTGACTTCAATCCTCCCTTCATTCTATCTGCCACAGTTGACTTTTATTGA	3471	0.4249	MSAQQRFFCTLSHAYPLSSSLSTFKSRTFLFLPFLRSYLTLTPLLSPMPRNQRSGAHVERRWKEKAKTEAQLPATGDATAAETVTSKLAGLSIGESGGKTGAQGSVWKPKSYGTASGGAVTEIENGAGVEASVASTQKNGGSGLSKIFRDNLIEKFTVDKSTYARAQVRATFYPKFENEKSDQEVRTRMTELVAKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKQQAEFNNFLERNHMCISMELVTAVLGDHGQRPQEDYAVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSAASFFAAFDALCEEGTATSVCKALDEIAEISVPGSKDHVKAQGEILEGLVARLVSHDSSIHIEKTLKEFPPPHADGVALDFGPSLREICAANRNDEKQQIKALLESVGSSFCPSQSDWFGTDGADYHSRNVDRSVLSKFLQAHPADYSTKKLQEVVRLMREKRYPAAFKCYHNFHKVDAMSSDNIFYKMVIHVHSDSGFRRYQKDMRLKPGLWPLYRGFFVDINLFSANKETAAEISSNSVNETGSYSSGEDDFADEDANLMVKLKFLTYKLRTFLIRNGLSILFKEGPAAYKAYYLRQMKIWGTSPAKQRELSKMLDEWAVYIRRKCGNKQLSSSTYLSEAEPFLEQFAKRSPQNQVLIGSAGNLVRTEDFLAIVEGGQDEEGDLVAEREIALPGPNISVKDTVPKHGGLIVFFPGIPGCAKSSLCKELLNAEGGLEDGRPVHSLMGDLIKGKYWQKVAAECKKKPNSIMLADKNAPNEEVWKLIEDMCHKTRASAVPVVAESEGTDSNPFSLDSLAIFMFRVLQRVNHPGNLDKASPNAGYVLLMFYYLYQGRSRKEFEGDLIERFGSLVKMPLLKSDRNPLPEPVQSILEEGIDLYKLHTIRHGRLESTKGSYAKEWIKWEKELRDILCGNAEYFNSIQVPFEFAVKQVFEQLRNIANGHYTPPDTEIRKFGTIVFAALTMPVTEIKSALNKLAESNPKIDAFLKDKHLENLNRAHLTLAHKRSHGIKAVADYGIHLNQKVPVELTALLFSDKMAAFEACPGSVEGEKIVSKNPWPHITLWTAEGVGAKEANMLPQLLAEGKAKRIDFNPPFILSATVDFY*	1157

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu11g0744	1156	MobiDBLite	consensus disorder prediction	54	70	-	-
	Pvu11g0744	1156	PANTHER	TRNA LIGASE 1	103	1140	-	-
	Pvu11g0744	1156	PANTHER	TRNA LIGASE 1	103	1140	IPR038837	GO:0003972\|GO:0006388
	Pvu11g0744	1156	MobiDBLite	consensus disorder prediction	49	79	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu11g0744	-		-	gmx:100815563	2092.78

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu11g0744	11	6528220	6552343	Pvu11g0744	11	6528220	6552343	ECH