Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g0737 | ATGGCAGCGTCGCGAATCGTAGCCCACCCTCCGCCCTATCTCCACCGCCAATGTCCGCCGTCAGACACCGTGCTGTTCCTCAGCCTCACGCGTCACGCAAAACGGTACCGTAACCTCAGCATTCGCGCCTCTCTTCACGAGGGGAAACAGAAGAAGAGCGATCTCGCCGATAAACCTCACTCTGTCGAATTGCGAACCAGCCCCGACGACGTCGTTTCCCGCGATCCGATCGTTCTTCCACGGCCTTTGTCTGCTTCAGTTTCCGACGGTTCAGGCCTTCGTGTGGCATATCAGGGGGTTCATGGTGCTTACAGTGAATCAGCAGCACATAAAGCCTACCCAAATTGTGAAGCTGTGCCGTGTGAACAATTTGAAACCACTTTTGATGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGAGGGAGTATCCACAGAAATTATGACCTTTTACTCCGGCATAGTTTACATATAGTAGGAGAAGTAAAATATGCTGTCCGTCATTGTTTGATGGCCAACCATGGTGTTAAACTTGAGGATTTGAACCGGGTTCTAAGTCATCCACAGGCTCTTGCTCAATGCGAGAACACACTGACAAAGTTGGGATTGGTGCGAGAAGCAGTTGATGATACAGCTGGTGCCGCTAAGCATGTTGCCTTGCTCGGACTACAAGATGCAGGAGCACTTGCTAGTTCTTCCGCTGCAGAGATCTATGGCTTGAATATACTTGCTGAAGACATTCAGGATGATAGTGATAATGTCACTCGATTTTTAATGTTAGCACGAGAACCTATAATTCCAGGAACTGATAGGCCATTTAAGACAAGCATAGTTTTTTCTTTAGAAGAGGGTCCTGGGGTTCTTTTCAAGGCCCTTGCTGTTTTTGCTTTGCGCCAGGTTAACCTTACAAAGATTGAAAGCCGTCCTCTGCGAAACCAACCTCTACGAGCATCAGATGATAGCAGCAATTCCAAGTACTTTGATTATCTTTTCTATGTTGATTTTGAAGCATCAATGGCTAATCCGAATGCACAAAATGCCCTAAGGCATCTAAAGGAGTTTGCTACATTCCTGCGAGTGCTAGGGAGCTATCCAGTGGACACTAGCTCGACGTGA | 1137 | 0.4749 | MAASRIVAHPPPYLHRQCPPSDTVLFLSLTRHAKRYRNLSIRASLHEGKQKKSDLADKPHSVELRTSPDDVVSRDPIVLPRPLSASVSDGSGLRVAYQGVHGAYSESAAHKAYPNCEAVPCEQFETTFDAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVKYAVRHCLMANHGVKLEDLNRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKHVALLGLQDAGALASSSAAEIYGLNILAEDIQDDSDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQVNLTKIESRPLRNQPLRASDDSSNSKYFDYLFYVDFEASMANPNAQNALRHLKEFATFLRVLGSYPVDTSST* | 379 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g0737 | 378 | CDD | PBP2_Ct-PDT_like | 94 | 271 | - | - | |
| Pvu11g0737 | 378 | ProSiteProfiles | Prephenate dehydratase domain profile. | 94 | 269 | IPR001086 | GO:0004664|GO:0009094 | |
| Pvu11g0737 | 378 | PANTHER | AROGENATE DEHYDRATASE | 27 | 376 | - | - | |
| Pvu11g0737 | 378 | ProSitePatterns | Prephenate dehydratase signature 1. | 245 | 267 | IPR018528 | GO:0004664|GO:0009094 | |
| Pvu11g0737 | 378 | MobiDBLite | consensus disorder prediction | 47 | 67 | - | - | |
| Pvu11g0737 | 378 | Gene3D | - | 178 | 257 | - | - | |
| Pvu11g0737 | 378 | Gene3D | - | 89 | 177 | - | - | |
| Pvu11g0737 | 378 | Gene3D | - | 276 | 375 | - | - | |
| Pvu11g0737 | 378 | CDD | ACT_CM-PDT | 281 | 372 | - | - | |
| Pvu11g0737 | 378 | ProSiteProfiles | ACT domain profile. | 283 | 372 | IPR002912 | - | |
| Pvu11g0737 | 378 | ProSitePatterns | Prephenate dehydratase signature 2. | 309 | 316 | IPR018528 | GO:0004664|GO:0009094 | |
| Pvu11g0737 | 378 | SUPERFAMILY | Periplasmic binding protein-like II | 94 | 275 | - | - | |
| Pvu11g0737 | 378 | SUPERFAMILY | ACT-like | 264 | 373 | IPR045865 | - | |
| Pvu11g0737 | 378 | PANTHER | PREPHENATE DEHYDRATASE P PROTEIN | 27 | 376 | - | - | |
| Pvu11g0737 | 378 | Pfam | Prephenate dehydratase | 95 | 271 | IPR001086 | GO:0004664|GO:0009094 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu11g0737 | Pvu-Chr11 | 6420434 | 6425675 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu11g0737 | K05359 | - | gmx:100787387 | 623.624 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu11g0737 | 11 | 6420434 | 6425675 | Pvu11g0737 | 11 | 6420434 | 6425675 | ECH |