Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0717 ATGAAATTTCCCATCACCACATTCACTCTCAAACCTTTCTTCTTCCTCTTCATTTTACTCACATCAACCCATGCAGGAACCATCTCCACCCCAACTTCAAACCTATTCCGAGAATACATAGGAGCCGAGTTCAACAACGTTAAATTCTCCGATCTCCCCATTAACCCCACTGTCCAATTCCACTTCATTCTCTCCTTCGCCATCGACTACGACACCTCCTCCTCCTCTCCCACCAATGGAAAATTCAACATCTTTTGGGACACCGACAACCTTAGCCCCACCCAAGTCTCCGCCATCAAGGCCAAAAACTCAAACGTCAAAGTAGCCCTCAGTCTGGGAGGCGACAGCGTTGGAGGCGGCTACGCTTACTTCAACCCCTCTTCCATCGATTCCTGGGTTTCCAACGCCGTTTCTTCACTCACAGCCATAATCAAAGAGTACAACCTAGACGGAATCGACATCGACTACGAGCACTTCAAAACGGACCCTCAAACCTTCTCGGAGTGCGTGGGGAGGCTAATCAAGACGCTCAAATCCAACGGGGTCATACAATTCGCCTCCATTGCTCCTTTTGACGATCCCCAAGTTCAGAGCCACTACTTGGCCCTCTGGAAGAGTTACGGTAGCTTCATAGACTACGTTAACTTTCAGTTCTATGCGTATGACAAGGGCACCAGTGTGGCACAGTTCATCGACTACTTCAACACCCAGAGTTCCAATTACAAGGGTGGAAAGGTGCTGGTGAGTTTCATCAGTGATGGCAGTGGTGGCTTGGCTCCAAACGATGGCTTCTTCACAGCATGTCACACTCTGAAGACTCAGCAGAACCTTCATGGCATCTTTGTCTGGTCTGCTGATGACTCCATGGGAAATGGTTTTCGTTATGAGAAGCAATCACAAGCCCTTTTAGCTTTACCCTAG 921 0.4864 MKFPITTFTLKPFFFLFILLTSTHAGTISTPTSNLFREYIGAEFNNVKFSDLPINPTVQFHFILSFAIDYDTSSSSPTNGKFNIFWDTDNLSPTQVSAIKAKNSNVKVALSLGGDSVGGGYAYFNPSSIDSWVSNAVSSLTAIIKEYNLDGIDIDYEHFKTDPQTFSECVGRLIKTLKSNGVIQFASIAPFDDPQVQSHYLALWKSYGSFIDYVNFQFYAYDKGTSVAQFIDYFNTQSSNYKGGKVLVSFISDGSGGLAPNDGFFTACHTLKTQQNLHGIFVWSADDSMGNGFRYEKQSQALLALP* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0717 306 PANTHER 2, PUTATIVE, EXPRESSED-RELATED 17 304 - -
Pvu11g0717 306 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 149 157 IPR001579 GO:0004553|GO:0005975
Pvu11g0717 306 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 34 300 IPR001223 GO:0005975
Pvu11g0717 306 PRINTS 2-S globulin family signature 33 46 IPR000677 -
Pvu11g0717 306 PRINTS 2-S globulin family signature 79 94 IPR000677 -
Pvu11g0717 306 PRINTS 2-S globulin family signature 96 114 IPR000677 -
Pvu11g0717 306 PRINTS 2-S globulin family signature 266 285 IPR000677 -
Pvu11g0717 306 Pfam Glycosyl hydrolases family 18 61 223 IPR001223 GO:0005975
Pvu11g0717 306 CDD GH18_narbonin 35 288 - -
Pvu11g0717 306 Gene3D Glycosidases 32 305 - -
Pvu11g0717 306 PANTHER CHITINASE 2-LIKE 17 304 - -
Pvu11g0717 306 SUPERFAMILY (Trans)glycosidases 33 298 IPR017853 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0717 - - gmx:100810745 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1439 5 36821503 36822551 Pvu11g0717 11 6110034 6110954 PCT