Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0713 ATAATTCCAGTGGCGCCAAAAGGAAGAGCCACTCACTCTCATCTACGTCATCGATCCGTGCACAACGTTATCTCAAATCTGAATCGTCCACCAAGAAGGCATCGACGCTCCCAAACGATTCGCTGCAAGCCTCCCACGGATCCACAAACACATCACCCCATCCCCAACACCACATATAAATACAAAGAGAATTTCGCAAACACTTCAGACGCCAATCTCCTCATCGATCTTCTCTTCCGCAAGATGTCTGGGCGTGGAAAGGGAGGCAAGGGTTTGGGAAAGGGAGGAGCAAAACGACACCGTAAGGTGTTGCGCGACAACATCCAGGGAATTACGAAGCCTGCCATTCGGCGTTTGGCGCGTAGGGGTGGCGTGAAGCGTATCAGTGGTCTCATCTACGAAGAGACTCGCGGGGTTCTCAAGATCTTTCTTGAGAACGTGATTCGCGACGCCGTTACTTACACTGAGCACGCCAGGAGAAAGACCGTTACGGCAATGGATGTGGTCTATGCACTCAAGAGACAGGGAAGAACCCTGTACGGATTTGGGGGCTAG 555 0.5189 IIPVAPKGRATHSHLRHRSVHNVISNLNRPPRRHRRSQTIRCKPPTDPQTHHPIPNTTYKYKENFANTSDANLLIDLLFRKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0713 184 CDD H4 99 182 IPR001951 GO:0003677|GO:0030527
Pvu11g0713 184 ProSitePatterns Histone H4 signature. 96 100 IPR019809 GO:0000786|GO:0003677
Pvu11g0713 184 PANTHER HISTONE H4 40 184 - -
Pvu11g0713 184 SMART h44 97 171 IPR001951 GO:0003677|GO:0030527
Pvu11g0713 184 MobiDBLite consensus disorder prediction 28 56 - -
Pvu11g0713 184 PRINTS Histone H4 signature 86 97 IPR001951 GO:0003677|GO:0030527
Pvu11g0713 184 PRINTS Histone H4 signature 101 120 IPR001951 GO:0003677|GO:0030527
Pvu11g0713 184 PRINTS Histone H4 signature 121 141 IPR001951 GO:0003677|GO:0030527
Pvu11g0713 184 PRINTS Histone H4 signature 143 157 IPR001951 GO:0003677|GO:0030527
Pvu11g0713 184 PRINTS Histone H4 signature 158 170 IPR001951 GO:0003677|GO:0030527
Pvu11g0713 184 PRINTS Histone H4 signature 170 181 IPR001951 GO:0003677|GO:0030527
Pvu11g0713 184 SUPERFAMILY Histone-fold 84 183 IPR009072 GO:0046982
Pvu11g0713 184 Pfam Centromere kinetochore component CENP-T histone fold 121 177 IPR035425 -
Pvu11g0713 184 Gene3D Histone, subunit A 83 184 IPR009072 GO:0046982
Pvu11g0713 184 PANTHER HISTONE H4 40 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0713 Pvu-Chr11 6063327 6064001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0713 K11253 - taes:123114970 196.052