Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0710 ATGGAGTCACCAACTGTGCAGCCGCAAGCTGCATCGGCAAGCACGCCAAGGAAAAAAATGACAAAACAATTGACAGGTAAAAGGGATGATACCTCTTTGCATTCTGCAGCAAGAGCAGGGAATCTGAGCGTTCTGAAGGACACAGTTAGTGGCACTGAAGGGGGTGAACTGCGTGCGTTGTTGACAAAGCAGAACCATGCTGGAGAAACGGTGCTTTATGTTGCTGCTGAATATGGTTATGTTGATATGGTTAGGGAGATGATTCAATATTATGATCTTGCTGGTGCTGGAATTAAGGCAAGGAATGGTTTTGATGCACTCCACATTGCTGCCAAACAAGGCGATTTAGATATTGTGAAGATCCTTATGGAGACTCATTCTGAATTGTCAATGACAGTGGATCTATCCAACACCACAGCCCTGCACACTGCTGCATTACAAGGGCACACTGAGATAGTGAAATTTTTATTGGAAGCAGGTAGTAGTCTGGCAACCATTGCTAGAAGTAATGGGAAAACGGCTTTGCATTCTGCAGCAAGAAATGGACATGTAGAGGTTGTGAAAGCACTTCTGGAGAAGGAGCCTGCTGTCGCAACGCGGACTGATAAGAAGGGACAGACAGCACTTCACATGGCTGTGAAGGGACAGAATCTTGCGGTGGTGGAGGAGTTGATAAAAGCTGATCCCTCGACAATAAACATGGTTGATAACAAGGGTAACACGCCATTGCATATAACAACCCGGAAGAGCAGGGCTCAGATTGTTAAGTTGCTTCTTGGACAGACAGAAACAGATTCCTTGGCAGTTAATAGGGCTGGCGAAACTGCGCTAGACACTGCTGAAAAAACTGGGAACTCTGAAGTTAAAGATATTCTGCTGGAACACGGTGTTCGAAGCGCCAAAGCCTTAAAGGCTCAGCCAACAACAGCCCGTGAGTTGAAACAAACTGTGAGTGACATAAAACATGAAGTTCACTACCAGTTGGAACACACCCGCCAAACTAGACGAGGTGTTCAAGGCATAGCCAAACGTATCAACAAAATGCATGCTGAAGGACTCAACAATGCAATAAACTCCACCACTGTGGTTGCAGTCCTTATTGCCACAGTTGCCTTTGCAGCTATTTTCACAGTCCCTGGCCAATTTGCTGATGATCCAAAAGACATTTCTCCAGGTTCAGGGATGACCATTGGTGAAGCAAACATAGCCCCACAAGCTGCATTTCTCATTTTCTTTGTTTTCGATTCCATTGCCCTCTTCATTTCTCTGGCTGTGGTGGTGGTGCAAACCTCGGTTGTGATCATAGAAAGCAAGGCAAAGAAGCAGATGATGGCCATCATTAACAAGCTGATGTGGTTGGCTTGTGTGCTTATTTCTGTGGCCTTCTTGGCACTGACATTTGTAGTAGTGGGGAAGGATCAGAAGTGGCTAGCAATTGGAGTCACTATCATAGGGACAACTATAATGGCCACAACTTTGGGCACCATGTGTTACTGGGTTATTAGGCATCGCATTGAGGCCTCAAATTTAAGAAGCATTCGGAAATCCTCAATGGGAAGCAGGTCAAGGTCTTTTTCAGTATCAGTTATGTCAGATTCTGAGCTACTAAACAATGACCGCAAGATACTTTATGCCATATAG 1641 0.4522 MESPTVQPQAASASTPRKKMTKQLTGKRDDTSLHSAARAGNLSVLKDTVSGTEGGELRALLTKQNHAGETVLYVAAEYGYVDMVREMIQYYDLAGAGIKARNGFDALHIAAKQGDLDIVKILMETHSELSMTVDLSNTTALHTAALQGHTEIVKFLLEAGSSLATIARSNGKTALHSAARNGHVEVVKALLEKEPAVATRTDKKGQTALHMAVKGQNLAVVEELIKADPSTINMVDNKGNTPLHITTRKSRAQIVKLLLGQTETDSLAVNRAGETALDTAEKTGNSEVKDILLEHGVRSAKALKAQPTTARELKQTVSDIKHEVHYQLEHTRQTRRGVQGIAKRINKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFADDPKDISPGSGMTIGEANIAPQAAFLIFFVFDSIALFISLAVVVVQTSVVIIESKAKKQMMAIINKLMWLACVLISVAFLALTFVVVGKDQKWLAIGVTIIGTTIMATTLGTMCYWVIRHRIEASNLRSIRKSSMGSRSRSFSVSVMSDSELLNNDRKILYAI* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0710 546 Gene3D - 7 166 IPR036770 -
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat profile. 238 259 IPR002110 GO:0005515
Pvu11g0710 546 Pfam Domain of unknown function 351 468 IPR026961 -
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat profile. 204 226 IPR002110 GO:0005515
Pvu11g0710 546 Pfam Ankyrin repeats (3 copies) 170 229 IPR002110 GO:0005515
Pvu11g0710 546 Pfam Ankyrin repeats (3 copies) 88 163 IPR002110 GO:0005515
Pvu11g0710 546 Pfam Ankyrin repeats (3 copies) 238 297 IPR002110 GO:0005515
Pvu11g0710 546 PANTHER ANKYRIN REPEAT PLANT PROTEIN 7 546 - -
Pvu11g0710 546 MobiDBLite consensus disorder prediction 1 20 - -
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat region circular profile. 136 163 - -
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat region circular profile. 102 130 - -
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat profile. 170 202 IPR002110 GO:0005515
Pvu11g0710 546 SUPERFAMILY Ankyrin repeat 33 297 IPR036770 -
Pvu11g0710 546 SMART ANK_2a 170 199 IPR002110 GO:0005515
Pvu11g0710 546 SMART ANK_2a 238 269 IPR002110 GO:0005515
Pvu11g0710 546 SMART ANK_2a 204 234 IPR002110 GO:0005515
Pvu11g0710 546 SMART ANK_2a 102 131 IPR002110 GO:0005515
Pvu11g0710 546 SMART ANK_2a 67 96 IPR002110 GO:0005515
Pvu11g0710 546 SMART ANK_2a 272 302 IPR002110 GO:0005515
Pvu11g0710 546 SMART ANK_2a 28 59 IPR002110 GO:0005515
Pvu11g0710 546 SMART ANK_2a 136 165 IPR002110 GO:0005515
Pvu11g0710 546 MobiDBLite consensus disorder prediction 1 33 - -
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat region circular profile. 238 259 - -
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat profile. 102 134 IPR002110 GO:0005515
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat region circular profile. 170 193 - -
Pvu11g0710 546 Gene3D - 167 338 IPR036770 -
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat profile. 136 168 IPR002110 GO:0005515
Pvu11g0710 546 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 7 546 - -
Pvu11g0710 546 ProSiteProfiles Ankyrin repeat region circular profile. 204 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0710 Pvu-Chr11 6029959 6033709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0710 11 546 Miscellaneous Gene Families AT1G07710 71.881 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0710 - - gmx:100808971 925.235