Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0688 ATGTCTCGTATCTCCACATTCTATCTCCTCGCTTACAACTCCTTTCAGACCGTTGGATGGACGCTTTCCTTAATTAAGATTTTGTACAATGTTCTCGTCACTGCTTCCATCAACGGAACCTATGCTTCCGCCGGCAACTTAATATGTTTTCTGCAATGTGCTGCATTTTTGGAAGTTATACACGGAGCTATCGGTATTGTGCCCAGCGGAGTTTTGCTTCCTCTTATGCAATGGGGAGGAAGAACCCATTTTGTGCTTGCCATTGTTCGGAAACTTGATGAGCTCCAGGAATTACCTTCAGTTTTTATCACTTTTCTTGCATGGAGTATGGGTGAGGTCATTAGGTATTCACATTATGCTTTCAGTTGTTTGGGGAATTGTCCTTCTTGGATGACCTATCTCAGGTACACCGCGTTTATTGTGCTGTATCCTTTGGGAGTGGGTCCTGGTGAAATTTGGACTATGTACCAGGCGCTTCCAATTATAAAGAAGAAGAATCTCTATGCAGATTCCTTTTCAGGCCTCCCATTTAGTTATTATGAGTTCCTTAAGGTTGTTCTTGTAGTTTATCCATTCCTTTGGTTCAAACTTTACCTGCATATGTTCAAGCAACGACGTGCAAAACTTTATAAACGCCATGACAAGAAAACGGCTTGA 657 0.4201 MSRISTFYLLAYNSFQTVGWTLSLIKILYNVLVTASINGTYASAGNLICFLQCAAFLEVIHGAIGIVPSGVLLPLMQWGGRTHFVLAIVRKLDELQELPSVFITFLAWSMGEVIRYSHYAFSCLGNCPSWMTYLRYTAFIVLYPLGVGPGEIWTMYQALPIIKKKNLYADSFSGLPFSYYEFLKVVLVVYPFLWFKLYLHMFKQRRAKLYKRHDKKTA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0688 218 Pfam Protein tyrosine phosphatase-like protein, PTPLA 52 209 IPR007482 -
Pvu11g0688 218 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 4 216 - -
Pvu11g0688 218 PANTHER PTPLA DOMAIN PROTEIN 4 216 IPR007482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0688 Pvu-Chr11 5819371 5823622 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0688 K10703 - gmx:100527607 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0688 11 5819371 5823622 Pvu11g0688 11 5819371 5823622 ECH