Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0686 ATGTCGGTGAGTTCGAGTTCCAGGGGAAGGATAACGACGGAGCTTCAAGTCCCCAAGAAATTTACTGACAGAGAAACCAGTCCAGAGAGAACCAAGGTTTGGGCCGAGCCCAAGCCCAAAACGCCCAGAAGGGTCTCCGTCGTTTACTACCTCTCCCGAAACGGCCAACTCGAACACCCTCATTTCATGGAGGTTCCTCTCTCTTCATCTCAAGGACTTTACCTCAAAGACGTGATCAACCGCTTGAACGTTCTCCGAGGGAAATCCATGCCCACCATGTACTCTTGGTCCTCCAAAAGGAGCTACAAAAACGGCTTCGTTTGGCACGACTTGTCGGAGAACGATTTCATCTACCCGACGCAGGGGCAGGACTACATTCTCAAAGGTTCGGAGATTGTTGAGAACACTGTCGCCGGCGGTGCGAGGGTTAACAAAACGGAGGAGGAGTCCGCTTCGCCTGTGGTGATCACGAGGCGGCGGAACCAGTCGTGGAGTTCTATCGATTTGAACGAGTACCGTGTTTATAAATCCGAATCGTTCGGTGACTCGGCTGGGAGAATCGGCGCCGACGCGGCCACTCAGACGGAGGAGAAGCGGAGGCGAAGAAGGGCGGCGAGGGGGGAAGAGGCGGAAGATATTCAAGAGAAGAATGGTGGAATTGACGCGGGAATGGATGGGGAGAGGGTTCCGCACGTGACTTGTGATAATAACATTAATCATACTACGGAGCTGAGCAGGGATGAGATCTCGCCTCCACCGTCGGATTCGAGCCCCGAGACGCTGGAGACTCTGATGAAAGCAGATGGACGGCTCGGATTGCGGTCTTCGGAATCGGAGAAGGGGAATCTGACGGTGGAGAGCTGTCCTAGTGGGAGGATGAGAGCGTCGTCGGTTTTGTTGCAGTTGTTATCGTGCGGCGCTGTGTCGTTTAAGGAGTGTGGGGCTAACGCAGCGAAAGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCCAGGATGCCCCGCGGAGCAGGGAATCAAGTGGGAAAAGATACAGGGATATCGATGGAAATTCCGGATTTGAGCAGGCTAAGGTTGGAAGATAAAGAATATTTTAGTGGGAGCTTGATCGAAACCAAGAAAGTGGAAACCCCAGCTTTGAAGAGGTCTTCTTCTTACAATGCAGATAGCGGTTCCCGGTTACAAATAGTGGAGCATGAAGGAGAAGTGGTGCGGGCAAAGTGCATACCAAGGAAATCTAAGACACTACCAACTAAGAAAGAAGAGGGTACTTCCATGCATATTGGTACCGGTGGTCAACACGGAAGCAAAAGATTTGACGCACAACAATAA 1332 0.5195 MSVSSSSRGRITTELQVPKKFTDRETSPERTKVWAEPKPKTPRRVSVVYYLSRNGQLEHPHFMEVPLSSSQGLYLKDVINRLNVLRGKSMPTMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEIVENTVAGGARVNKTEEESASPVVITRRRNQSWSSIDLNEYRVYKSESFGDSAGRIGADAATQTEEKRRRRRAARGEEAEDIQEKNGGIDAGMDGERVPHVTCDNNINHTTELSRDEISPPPSDSSPETLETLMKADGRLGLRSSESEKGNLTVESCPSGRMRASSVLLQLLSCGAVSFKECGANAAKDQGFSLVGHYKSRMPRGAGNQVGKDTGISMEIPDLSRLRLEDKEYFSGSLIETKKVETPALKRSSSYNADSGSRLQIVEHEGEVVRAKCIPRKSKTLPTKKEEGTSMHIGTGGQHGSKRFDAQQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0686 443 Pfam Protein SOSEKI, plant 45 390 IPR010369 -
Pvu11g0686 443 PANTHER OS01G0839200 PROTEIN 11 413 - -
Pvu11g0686 443 MobiDBLite consensus disorder prediction 183 226 - -
Pvu11g0686 443 MobiDBLite consensus disorder prediction 192 222 - -
Pvu11g0686 443 MobiDBLite consensus disorder prediction 17 37 - -
Pvu11g0686 443 MobiDBLite consensus disorder prediction 1 37 - -
Pvu11g0686 443 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 11 413 IPR010369 -
Pvu11g0686 443 PIRSF UCP031043 13 430 IPR021182 -
Pvu11g0686 443 MobiDBLite consensus disorder prediction 411 443 - -
Pvu11g0686 443 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0686 Pvu-Chr11 5796368 5804104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0686 - - gmx:100779732 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0686 11 5796368 5804104 Pvu11g0686 11 5796368 5804104 ECH