Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0682 ATGGCACCAAAGGCAGAGAAGAAGCCAGCGGAGAAGAAGCCCGCGGAGGAGAAGAAGTCTACGGTTGGGGACAAGGCTCCGGCGGAGAAGAAGCCGAAGGCAGGAAAGAAGCTTCCGAAGGAGGCAGGAGCTGGTGGTGATAAGAAGAAGAAGAGAAACAAGAAGAGTGTGGAGACATACAAGATCTACATCTTCAAGGTTCTAAAGCAGGTTCACCCTGACATTGGTATCTCCAGCAAGGCCATGGGCATCATGAACAGTTTCATCAACGACATCTTTGAGAAGCTTGCTCAGGAATCTTCTAGACTTGCCCGCTACAACAAGAAACCCACCATCACTTCAAGGGAAATCCAAACTGCGGTCAGACTTGTGCTGCCTGGAGAATTGGCCAAACATGCTGTCTCAGAGGGTACCAAGGCTGTTACTAAGTTCACTAGTTCTTGA 444 0.4955 MAPKAEKKPAEKKPAEEKKSTVGDKAPAEKKPKAGKKLPKEAGAGGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0682 147 SMART h2b3 50 146 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0682 147 Gene3D Histone, subunit A 22 147 IPR009072 GO:0046982
Pvu11g0682 147 PANTHER HISTONE H2B.11-RELATED 5 147 - -
Pvu11g0682 147 SUPERFAMILY Histone-fold 37 147 IPR009072 GO:0046982
Pvu11g0682 147 ProSitePatterns Histone H2B signature. 115 137 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0682 147 MobiDBLite consensus disorder prediction 1 54 - -
Pvu11g0682 147 Pfam Core histone H2A/H2B/H3/H4 4 123 IPR007125 GO:0003677
Pvu11g0682 147 PANTHER HISTONE H2B 5 147 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0682 147 PRINTS Histone H2B signature 60 78 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0682 147 PRINTS Histone H2B signature 79 99 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0682 147 PRINTS Histone H2B signature 101 118 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0682 147 PRINTS Histone H2B signature 118 131 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0682 147 PRINTS Histone H2B signature 131 144 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0682 Pvu-Chr11 5769483 5770227 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0682 K11252 - gmx:111828532 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0682 11 5769483 5770227 Pvu11g0682 11 5769483 5770227 ECH