Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0678 ATGGCACCAAAGGCAGAGAAGAAGCCAGCGGAGAAGAAGCCGGCGGAGGAGAAGAAGTCCACGGTTGGGGACAAGGCTCCGGCGGAGAAGAAGCCAAAGGCAGGAAAGAAGCTTCCGAAGGAGGGAGGAGCTGGTGGTGATAAGAAAAAGAAGAGAAACAAGAAGAATGTGGAGACATACAAGATCTACATCTTCAAGGTTCTGAAGCAGGTTCACCCTGACATTGGTATCTCCAGCAAGGCCATGGGCATCATGAACAGTTTCATCAACGACATCTTCGAGAAGCTTGCCCAGGAATCTTCTAGACTTGCCCGCTACAACAAGAAACCCACCATCACCTCAAGGGAAATCCAGACTGCGGTCAGACTTGTTCTGCCCGGAGAATTAGCCAAACATGCTGTCTCAGAGGGTACCAAGGCCGTTACAAAGTTCACTAGTTCTTGA 444 0.5023 MAPKAEKKPAEKKPAEEKKSTVGDKAPAEKKPKAGKKLPKEGGAGGDKKKKRNKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0678 147 ProSitePatterns Histone H2B signature. 115 137 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0678 147 Gene3D Histone, subunit A 23 147 IPR009072 GO:0046982
Pvu11g0678 147 MobiDBLite consensus disorder prediction 1 53 - -
Pvu11g0678 147 Pfam Core histone H2A/H2B/H3/H4 4 123 IPR007125 GO:0003677
Pvu11g0678 147 PANTHER HISTONE H2B.1-RELATED 5 147 - -
Pvu11g0678 147 SMART h2b3 50 146 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0678 147 PANTHER HISTONE H2B 5 147 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0678 147 SUPERFAMILY Histone-fold 39 147 IPR009072 GO:0046982
Pvu11g0678 147 PRINTS Histone H2B signature 60 78 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0678 147 PRINTS Histone H2B signature 79 99 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0678 147 PRINTS Histone H2B signature 101 118 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0678 147 PRINTS Histone H2B signature 118 131 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu11g0678 147 PRINTS Histone H2B signature 131 144 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0678 Pvu-Chr11 5741225 5742147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0678 K11252 - gmx:100817849 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0678 11 5741225 5742147 Pvu11g0678 11 5741225 5742147 ECH