Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0630 ATGGGTGAGACAAACAGTGGTAGCAAAAGTAGCAGGTGGTGTCTGCAGGGGATGACAGCTCTGGTCACTGGTGGATCCAAAGGAATCGGAAATGCTATCGTGGAGGAGTTGGCTCAGCTGGGTGCAACTGTACACACTTGTGCTCGAAACGAAGCTGAACTCAATGATTCCTTAAACCAATGGACCACAAAAGGATACAGAGTAACTGGTTCGGTCTGTGACGTGGCCTCTCGTGTAAACAGACAAGAGCTCATAGCTAGAGTCTCCTCTCAGTTCAATGGAAAACTCAATATCCTTGTAAACAATGTGGGAACAAACATAAAGAAACAGACCGTGGATTTTACGGAGGAAGATTTCTCATTTCTGATCAACACAAATCTTGAATCTGCTTATCACATAAGCCAACTTGCACATCCTCTCCTAAAGGCTTCAGAGGCTGCAAGCATAGTTTTTATATCCTCCGTTGCTGGTGAGGTATCAGTAAATATAGGATCCATTTATGGTGCAACAAAAGGAGCAATTAACCAACTGACTAGAAACCTGGCATGCGAGTGGGCCAAAGACAATATAAGGACTAACTGCGTTGGACCAGGACCAATCAAAACCCCTCTCGGAGACACGGTCTTCAAAGATGCAAAAGTTCTGAATAGTTTCATTTCAAGAACCGCTCTTGGACGCCTTGGAGAGGCAGAGGAGGTGTCTTCGTTGGTGGCATTTCTGTGCTTGCCTGCAGCTTCTTACATTACAGGACAAACCATTTATGTTGATGGTGGCTTCATTGTGAACGCCCTTGGGTAA 798 0.4524 MGETNSGSKSSRWCLQGMTALVTGGSKGIGNAIVEELAQLGATVHTCARNEAELNDSLNQWTTKGYRVTGSVCDVASRVNRQELIARVSSQFNGKLNILVNNVGTNIKKQTVDFTEEDFSFLINTNLESAYHISQLAHPLLKASEAASIVFISSVAGEVSVNIGSIYGATKGAINQLTRNLACEWAKDNIRTNCVGPGPIKTPLGDTVFKDAKVLNSFISRTALGRLGEAEEVSSLVAFLCLPAASYITGQTIYVDGGFIVNALG* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0630 265 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
Pvu11g0630 265 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 261 IPR036291 -
Pvu11g0630 265 Pfam Enoyl-(Acyl carrier protein) reductase 26 259 - -
Pvu11g0630 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Pvu11g0630 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Pvu11g0630 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Pvu11g0630 265 Gene3D - 8 263 - -
Pvu11g0630 265 PANTHER TROPINONE REDUCTASE 3 264 IPR045000 GO:0016491
Pvu11g0630 265 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 3 264 - -
Pvu11g0630 265 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Pvu11g0630 265 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Pvu11g0630 265 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Pvu11g0630 265 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Pvu11g0630 265 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Pvu11g0630 265 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0630 Pvu-Chr11 5301897 5303792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0630 11 264 Miscellaneous Gene Families AT2G29150 64.567 2.94e-116 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0630 K08081 - gmx:100780806 444.121