Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0624 ATGAGCAGTGAAAGGAGAATTGGGGTGGCCTTGGATTTCTCCAAAGGAAGCAAGATTGCTCTCAAATGGGCAATTGATAATCTTCTCCGCAAAGGCGACACACTCTTAATCGTCCACATCAAGCACACCCAAGGCAGTGAATCCCGAAATCTTCTCTGGTCCACCACTGGATCACCTCTGATTCCGTTGTCAGAGTTTCGTGAGAAGGAGGTGATGCATCATTATGAGGTGGATTCTGATGCCGAGGTGTTGGATCTGCTTGACACTGCTTCTAAGCAGAAACAGGTGGATGTGGTGGCAAAGCTGTACTGGGGGGATGCAAGAGAGAAAATTTGTGAAGCTGTTGGGGATTTGAAGCTTCACACTTTGGTAATGGGTAGCAGAGGCTTGGGTGCCATACAGAGGGTATTGCTGGGGAGTGTGACAAATTATGTCACCTTAAATGCAAGTTGCCCTGTAACGATTGTGAAAGACACTACCCCTTCTACCATCTGA 495 0.4747 MSSERRIGVALDFSKGSKIALKWAIDNLLRKGDTLLIVHIKHTQGSESRNLLWSTTGSPLIPLSEFREKEVMHHYEVDSDAEVLDLLDTASKQKQVDVVAKLYWGDAREKICEAVGDLKLHTLVMGSRGLGAIQRVLLGSVTNYVTLNASCPVTIVKDTTPSTI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0624 164 Gene3D HUPs 2 163 IPR014729 -
Pvu11g0624 164 Pfam Universal stress protein family 5 157 IPR006016 -
Pvu11g0624 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Pvu11g0624 164 CDD USP_Like 6 156 - -
Pvu11g0624 164 PANTHER IMP2'P 1 162 - -
Pvu11g0624 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE SUPERFAMILY PROTEIN 1 162 - -
Pvu11g0624 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Pvu11g0624 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Pvu11g0624 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0624 Pvu-Chr11 5278341 5280004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0624 4 46 Receptor kinase-like Gene Family AT5G35380 48.837 2.10e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0624 - - gmx:100306505 283.108