Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0619 ATGTCAATCGTTCCAATGAACCAGGAGGAGGGCAACGCCTCCAATCTCTTCGCTATGTGGGATCCGTTCCTCGATTTTCCTCTCCCTCCTTCCATCTCCAATTTCTTCCCCGGTTTCGAATTCGGATCCGGGTCGTCGGTGAACACCCGTGTGGACTGGAGGGAGACGTCCAGAGCTCACGTGTGGAAGGTGGCGCTTCCCGGCTTCACCAACGAAGACGTGCTGGTGGAGCTCCAAGACGAGAGGGTGCTCCAAGTGAGCGTGGAGAGTGGGAACTTCATGACCAGGTTCAAGATCCCCGACAACGCTAACCTCGAACAACTCAAAGCCAACATGCGTCACGAGGTTCTTGTTGTCACTGTTCCCAAGGTTCACCAACCCCTTCCTCCACCTCCTAGTAGGAATCTCAGGGTCGTTCAAATTGACGGCACCGACTGA 438 0.5502 MSIVPMNQEEGNASNLFAMWDPFLDFPLPPSISNFFPGFEFGSGSSVNTRVDWRETSRAHVWKVALPGFTNEDVLVELQDERVLQVSVESGNFMTRFKIPDNANLEQLKANMRHEVLVVTVPKVHQPLPPPPSRNLRVVQIDGTD* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0619 145 Pfam Hsp20/alpha crystallin family 52 138 IPR002068 -
Pvu11g0619 145 Gene3D - 12 138 IPR008978 -
Pvu11g0619 145 SUPERFAMILY HSP20-like chaperones 24 127 IPR008978 -
Pvu11g0619 145 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 144 - -
Pvu11g0619 145 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 144 - -
Pvu11g0619 145 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 142 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0619 Pvu-Chr11 5244059 5244898 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0619 K13993 - gmx:100797426 216.468