Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0586 ATGGAGAAATACTTGGTCTCGCATAGACCTCCGATTGAAAAGGTTCAGCGTCTTCCAAGGCATTGGAAGAGGAGTTCGGTTGAACTAAATGGGAGATTTGAACGTAACTATCGTCATGAGATGATGGATTTGCTAATTCGATCGTATTCTGAGGTTGGAGTGTTTCCGCATCGGTATCAAGTGGACGGTTTGCCATGCCAGTCTCATACAAATCGTTTGATTGGTGAGGCAAATGGTTCTGATTATCTTCCATATAGAAAGCAAGGCATCTCTGCTGTAGATTTTGACAACAAGGGAATATACTTGGTGTCTGTGACAAAATCGGGTTGCTTAACAGTTCACGACTTTGAAACTCTTTATTCCCAGATACCCGAGTCAACATGCTTGCAAGAGGATGAAAGCAAACATTTAATGCACCTGTCACTAGGTCGACATCTTGATGCTGTCAAATGGAATCCTCTTAATCAGGATGAGGTTGTTTGTGCATCTGTCAAAAGTAATGAAGTACTCATATTCGATATTGGATACGTCTCATCCGATCCAGTTGCAGTGTTAAGAACAAGACGTACAGCCGCATTTATTGGATCCACCATACACATAGGTCTCTCTGATGTTGCCTTTACGTCAAATGACCCAAGGATACTTGCTTGTGATACAGATGGTGCAATTAATGTCTGGGATAGAAGAGTGAACTCTCTACCTTGTCTTGAGCTTCGATCTGCTTCATGTGGCACGCTTAACAGCATCCAATTAAATGCAGATAACCAGATTATTTTTGGTGCTGGAAAAGATGGGCTCGTACATGTATGGGATATTCGTGGTGGAAGAGCATCTGCCACTTTTCAAAGTCTCAAAGAGGTACGCCATCAACCTGTAAAATCAGTGAAATTGGCAACATTGCTTAAGAAGATTGGATCTTTGGAGGCACAGGCAAATATTGTTCCCAAGGAGATTCACTCTATTAATATTAATCCATCATGCCCATATCAGTTAGCATTCCATCTTAACGATGGCTGGTCGGGCGTTTTGGATATTAATAATTTTGAAGTTACACATATTCATTGCCCACCCCCTGCTTGGTTAAACGATTCCTATGTTCCCGCTGATCTATCATACTTAAGAAAACCTTCATGGTTATCAACTTGTTCGATCTATTTAGCCGGGTCACCATGCGGTATCCATCTCTTGGATTTTTATCCCAGCACCAACTCACCAAGCCACGTGGATTACAAGGAGGATGTCCAAGAAATTTCAAAGCGGAACAACCGAAGAAATCAGAACAGATTTATTTCTTTATCTGAAGGAATTATCTCATGCGTTGCTCATCCTTTGTATAATGCCATCGTAGCAGGAACCAAGAAAACTTCTTTGCTCGTGATTTCTCAAAAGCAACAGTCATTCAGAAGTGAAGATTAG 1416 0.4131 MEKYLVSHRPPIEKVQRLPRHWKRSSVELNGRFERNYRHEMMDLLIRSYSEVGVFPHRYQVDGLPCQSHTNRLIGEANGSDYLPYRKQGISAVDFDNKGIYLVSVTKSGCLTVHDFETLYSQIPESTCLQEDESKHLMHLSLGRHLDAVKWNPLNQDEVVCASVKSNEVLIFDIGYVSSDPVAVLRTRRTAAFIGSTIHIGLSDVAFTSNDPRILACDTDGAINVWDRRVNSLPCLELRSASCGTLNSIQLNADNQIIFGAGKDGLVHVWDIRGGRASATFQSLKEVRHQPVKSVKLATLLKKIGSLEAQANIVPKEIHSININPSCPYQLAFHLNDGWSGVLDINNFEVTHIHCPPPAWLNDSYVPADLSYLRKPSWLSTCSIYLAGSPCGIHLLDFYPSTNSPSHVDYKEDVQEISKRNNRRNQNRFISLSEGIISCVAHPLYNAIVAGTKKTSLLVISQKQQSFRSED* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0586 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 239 280 IPR001680 GO:0005515
Pvu11g0586 471 PANTHER WD40 REPEAT PROTEIN 12, 37 1 470 - -
Pvu11g0586 471 Gene3D - 82 466 IPR015943 GO:0005515
Pvu11g0586 471 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 470 - -
Pvu11g0586 471 SUPERFAMILY WD40 repeat-like 86 453 IPR036322 GO:0005515
Pvu11g0586 471 ProSitePatterns Trp-Asp (WD) repeats signature. 258 272 IPR019775 -
Pvu11g0586 471 SMART WD40_4 133 173 IPR001680 GO:0005515
Pvu11g0586 471 SMART WD40_4 70 115 IPR001680 GO:0005515
Pvu11g0586 471 SMART WD40_4 231 271 IPR001680 GO:0005515
Pvu11g0586 471 SMART WD40_4 190 227 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0586 - - gmx:100780441 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0586 11 4891599 4905947 Pvu11g0586 11 4891599 4905947 ECH