Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0577 ATGATGGCATTGCGTTTGGACTTGTTTCCGTTGCTCTGCGTTTTCTCACTTTTTGTTACCTCCTTCGTCAACATCACTCATTCCAAGGCCATTGCACCCATTCTTGGCGCTTCATTTCTCAACCGGAGCAGTTTTCCCCAAGACTTTGTTTTTGGGGCAGCATCCTCAGCATACCAGTATGAAGGTGCTGCAAGGGAAGGTGGAAGAGGACCCAGTATATGGGATACTTTCACTCACAAATACCCACAAAAAATAAAAGATGGAAGTAATGGAGATGTAGCAGACGACTCATATCATCGGTACAAGGAGGATATTGGAATCATGAAGTACATGAATTTGGATGCTTATAGATTTTCCATTTCTTGGTCTAGGATTCTACCGAAAGGAAAGCTTAGTGCAGGTGTAAACCAAGAAGGAATAAACTACTACAACAACCTTATCAATAAGCTAATGGCTAATGGTCTGCAACCATATGTCACCCTTTTTCATTGGGACGTTCCCCAAGCGTTAGAGGATGAGTATGGGGGTTTCTTAAACCGTCACATTGTAGATGATTTTAGGGACTATGCTGAAGTTTGCTTCAAGGAATTTGGAGATAGGGTGAAACATTGGATTACTTTGAATGAACCAAGGAGTGTGAGCAAGAATGGCTATGCAAATGGTAGGTTTGCACCTGGTCGGTGTTCTGATTGGTTAAAACTGAACTGCACTGGTGGTGATTCCGGAACTGAGCCCTATTTGACTTCACACTACCAACTTCTTGCTCATGCTGCTGCTGCCAAACTGTATAAGACCAAGTATCAGGCATCTCAAAAGGGTTTAATAGGGATTACCTTGAATTCTGACTGGTACGTTCCGGTTTCAATAGAGAAATCTGATCGAGATGCTGCACGTCGAGGCCTTGACTTCATGTTTGGATGGTTTATGGAACCACTCACTAAAGGTGAGTATCCAAAGAGCATGCGATCTATGTTGGGAAACCGGCTACCAGAGTTCACCAGAGAAGAGTCCTGGCAACTCAAAGGGTCATTTGATTTTCTGGGCCTAAACTACTACTCATCCTTTTATGCTGCCTATGCACCTCACCAACATGGTGTCAGACCAGCCTTACAAACTGATTCTCTTGTTAATGTTACAAATCAGCATGATGGCAGGCTCCTTGGTCCAATGGCTGCTTCTAACTGGTTGTGCATTTATCCACGAGGATTCCGACGACTGTTGCTTTTCATCAAGAAGCACTACAACAACCCTGTAATTTACATTACTGAAAACGGTTATGACGAGGTGAACGATCCAACACTTTCACTTGAAGAAAGCCTTAGAGATACATACAGAGTTGATTACTTATACTGGCATCTTTATTATCTTCAAACTGCAATCAAGGATGGTGTGAATGTAAAGGGATATTTTGTGTGGTCATTGCTGGATAACTTGGAGTGGGACTCTGGCTATAGTGTGCGATTTGGACTCGTCTTTGTGGATTTCAAAGATGGCTTGAAAAGATACCCCAAATTCTCGGCACATTGGTTCAAGAATTTCCTCAGTAAATCTTAG 1554 0.4266 MMALRLDLFPLLCVFSLFVTSFVNITHSKAIAPILGASFLNRSSFPQDFVFGAASSAYQYEGAAREGGRGPSIWDTFTHKYPQKIKDGSNGDVADDSYHRYKEDIGIMKYMNLDAYRFSISWSRILPKGKLSAGVNQEGINYYNNLINKLMANGLQPYVTLFHWDVPQALEDEYGGFLNRHIVDDFRDYAEVCFKEFGDRVKHWITLNEPRSVSKNGYANGRFAPGRCSDWLKLNCTGGDSGTEPYLTSHYQLLAHAAAAKLYKTKYQASQKGLIGITLNSDWYVPVSIEKSDRDAARRGLDFMFGWFMEPLTKGEYPKSMRSMLGNRLPEFTREESWQLKGSFDFLGLNYYSSFYAAYAPHQHGVRPALQTDSLVNVTNQHDGRLLGPMAASNWLCIYPRGFRRLLLFIKKHYNNPVIYITENGYDEVNDPTLSLEESLRDTYRVDYLYWHLYYLQTAIKDGVNVKGYFVWSLLDNLEWDSGYSVRFGLVFVDFKDGLKRYPKFSAHWFKNFLSKS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0577 517 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 36 516 - -
Pvu11g0577 517 PANTHER GLYCOSYL HYDROLASE 36 516 IPR001360 GO:0004553|GO:0005975
Pvu11g0577 517 PRINTS Glycosyl hydrolase family 1 signature 343 357 IPR001360 GO:0004553|GO:0005975
Pvu11g0577 517 PRINTS Glycosyl hydrolase family 1 signature 419 427 IPR001360 GO:0004553|GO:0005975
Pvu11g0577 517 PRINTS Glycosyl hydrolase family 1 signature 442 453 IPR001360 GO:0004553|GO:0005975
Pvu11g0577 517 PRINTS Glycosyl hydrolase family 1 signature 463 480 IPR001360 GO:0004553|GO:0005975
Pvu11g0577 517 PRINTS Glycosyl hydrolase family 1 signature 487 499 IPR001360 GO:0004553|GO:0005975
Pvu11g0577 517 SUPERFAMILY (Trans)glycosidases 34 515 IPR017853 -
Pvu11g0577 517 Gene3D Glycosidases 34 515 - -
Pvu11g0577 517 Pfam Glycosyl hydrolase family 1 43 516 IPR001360 GO:0004553|GO:0005975
Pvu11g0577 517 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0577 Pvu-Chr11 4807275 4811460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0577 4 516 Glycoside Hydrolase AT5G44640 54.864 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0577 - K01188 gmx:100801874 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0577 11 4807275 4811460 Pvu11g0577 11 4807275 4811460 ECH