Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0573 AGGATAGAGGACAGAAGCAATGGAGATGCTGCCGTGGATTCGTATCATCGTTACAAGGAAGATGTTCAGATTATGAAGGATATGAATTTGGATGCTTATAGATTTTCCATATCTTGGTCAAGAATACTTCCGAATGGAAAGCTAAGTGGAGGAATAAACCAAGAAGGAATTGACTATTATAACAACCTTATCAATGAGCTACTGGCAAATGGTTTAGAACCATTTGTGACTCTTTTTCATTGGGATCTTCCTCAAACTTTAGAAGATGAATATGGTGGTTTCTTAAGTCCTCGCATTGTGAAAGATTTCCAGGATTATGCAGAACTTTGTTTCAAGGAATTTGGAGATAGAGTGAAGAACTGGATAACTTTGAATGAGCCATGGACTTTCAGTGTCAAGGGTTATGCAGTAGGGGCAAAGGCCCCAGGTCGATGTTCTTCTTGGTTGAATCTTGATTGCAATGGTGGTGATTCTGGGACTGAACCCTATTTGGCTACACATTACCAACTTCTTGCTCATGCTGCAGCTGTTAATCTGTACAAGACAAAGTATCAGAGATTTCAGAATGGTGTGATAGGCATAACACTGTATTCTATTTGGTACGAGCCACTCTCAGAAAGCAAACTTGATCAAAAGGCTGCTGAACGAGCTATTGACTTCTTGTTTGGATGGTTTATGGATCCACTGACAAGAGGAGATTATCCAGAAAGCATGCGTTCCTTGGTAAAATCAAGATTACCAAAGTTTACAAAGGAGCAATCCAGATTGCTTATCAATTCATTTGATTTTCTCGGCATAAACTACTACACTGCGAATTATGTCTCTGATGCACCTGAATTAAGAAATGTCAGAGGCAATTACATAACAGATTCCCTTGTAAATTTTTCATTTGTGCGTGACGGAAAACCCATTGGTGAAAATGTTGGTTCAGACTGGTTGTACGTTTATCCAAAAGGATTTCGTGAAATTTTGCTATACATCAAAGAGAAATACAACAATCCTTTAATTTATATTACTGAAAATGGTGTAAATGAATATGATGATCCATCACTATCACTTGAAGAATCTCTCTTGGATACATATAGAATTGATTATTATTATCGTCATTTATATTATCTTCAGGATGCAATCAAGAATGGTGTAAATGTAAAAGGGTATTTCGCGTGGTCACTCTTAGACAATTTTGAATGGGAAGGTGGCTACATCATGCGATTTGGAATACACTATGTTGATTACAAAAATGGCTTGAAAAGATACCCAAAGCTTTCTGCTTTATGGTTCAAGGATTTTCTCAAAATAGAAACCAAACTTCATGATTCCATGTAA 1326 0.3703 RIEDRSNGDAAVDSYHRYKEDVQIMKDMNLDAYRFSISWSRILPNGKLSGGINQEGIDYYNNLINELLANGLEPFVTLFHWDLPQTLEDEYGGFLSPRIVKDFQDYAELCFKEFGDRVKNWITLNEPWTFSVKGYAVGAKAPGRCSSWLNLDCNGGDSGTEPYLATHYQLLAHAAAVNLYKTKYQRFQNGVIGITLYSIWYEPLSESKLDQKAAERAIDFLFGWFMDPLTRGDYPESMRSLVKSRLPKFTKEQSRLLINSFDFLGINYYTANYVSDAPELRNVRGNYITDSLVNFSFVRDGKPIGENVGSDWLYVYPKGFREILLYIKEKYNNPLIYITENGVNEYDDPSLSLEESLLDTYRIDYYYRHLYYLQDAIKNGVNVKGYFAWSLLDNFEWEGGYIMRFGIHYVDYKNGLKRYPKLSALWFKDFLKIETKLHDSM* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0573 441 Gene3D Glycosidases 1 433 - -
Pvu11g0573 441 SUPERFAMILY (Trans)glycosidases 2 432 IPR017853 -
Pvu11g0573 441 Pfam Glycosyl hydrolase family 1 2 432 IPR001360 GO:0004553|GO:0005975
Pvu11g0573 441 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 1 437 - -
Pvu11g0573 441 PANTHER GLYCOSYL HYDROLASE 1 437 IPR001360 GO:0004553|GO:0005975
Pvu11g0573 441 PRINTS Glycosyl hydrolase family 1 signature 260 274 IPR001360 GO:0004553|GO:0005975
Pvu11g0573 441 PRINTS Glycosyl hydrolase family 1 signature 336 344 IPR001360 GO:0004553|GO:0005975
Pvu11g0573 441 PRINTS Glycosyl hydrolase family 1 signature 359 370 IPR001360 GO:0004553|GO:0005975
Pvu11g0573 441 PRINTS Glycosyl hydrolase family 1 signature 380 397 IPR001360 GO:0004553|GO:0005975
Pvu11g0573 441 PRINTS Glycosyl hydrolase family 1 signature 404 416 IPR001360 GO:0004553|GO:0005975
Pvu11g0573 441 ProSitePatterns Glycosyl hydrolases family 1 active site. 336 344 IPR018120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0573 Pvu-Chr11 4759921 4762744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0573 7 436 Glycoside Hydrolase AT5G24550 55.300 8.98e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0573 - K01188 gmx:100820528 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0573 11 4759921 4762744 Pvu11g0573 11 4759921 4762744 ECH