Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0572 ATGGCATACAAAGAATACGTGCTTCTTCCTCTCATTCCTCTACTTTCCTTATTCATTACTGTCACAGAAAGCGGGGCCATTACTCCAGAAATAGCTTTGTTGAATCGCAACACTTTCCCAAATGGCTTCATCTTTGGTACAGCATCCTCAGCATATCAGTATGAAGGTGCAGCAAATGAGGGTGGTAGAGCACCAAGTATTTGGGATACCTTCACTCATAAATATCCAG 229 0.4236 MAYKEYVLLPLIPLLSLFITVTESGAITPEIALLNRNTFPNGFIFGTASSAYQYEGAANEGGRAPSIWDTFTHKYP 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0572 76 Pfam Glycosyl hydrolase family 1 36 74 IPR001360 GO:0004553|GO:0005975
Pvu11g0572 76 Gene3D Glycosidases 20 76 - -
Pvu11g0572 76 SUPERFAMILY (Trans)glycosidases 31 75 IPR017853 -
Pvu11g0572 76 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 43 57 IPR033132 -
Pvu11g0572 76 PANTHER GLYCOSYL HYDROLASE 1 75 IPR001360 GO:0004553|GO:0005975
Pvu11g0572 76 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0572 Pvu-Chr11 4759010 4759402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0572 1 76 Glycoside Hydrolase AT2G44470 44.737 1.49e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0572 - K01188 pvu:PHAVU_011G0558001 154.066