Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0571 ATGGCAAAGAACAGATATTATTTTCATGTTCATCTACATCTCATTGCTCTACTTTCTTCATTGATTACTGTTACAGAAGCTCTTGCTCCTACTCCTGAAATAACTCTGTTGAATCGAAGTAGTTTCCCACCTGGTTTCATCTATGGAACATCATCCTCAGCATACCAGTATGAAGGTGCAGCAAATGGGGGTGGTAGAGGACCAAGTATTTGGGATACCTTCACTCATAAATATCCAGAAAAGATAGTGGACAGAAGCAATGGAGATGTTGCTGTTGATTCGTATCATCGCTACAAGGAAGATGTTGGGATTATGAAGGATATGAATTTGGACGCTTACAGATTTTCCATATCTTGGTCTAGAATACTTCCGAATGGAAAGTTAAGTGGAGGTATAAATCAAGAAGGAGTTGACTATTACAACAACCTTATCAATGAGCTGGTGGCAAATGGTTTAGAACCATTTGTGACACTTTTCCATTGGGATCTTCCTCAATCTTTGGAAGATGAATATGGTGGCTTCTTAAGCTCTCGCATTGCGAAAGATTTTGAGGATTATGCAGAAGTTTGCTTCAAGGAATTTGGCGATAGAGTAAACAAATGGATAACTTTGAATGAGCCAATGACTTATAGCCACCTAGGTTATGCAACAGGGGAACTTGCACCGGGCCGATGTTCTACTTGGTTCAATCTTCATTGCAATGGTGGTGATTCTGGGATAGAACCCTATTTGGTCTCGCATCACCAGCTTCTTGCTCATGCAGCAGCTGTTAATGTGTACAAGACCAAGTACGAGAAAATGCAAAATGGTTTGATAGGCATAACTTTGAATTTTGTTTGGTATGAGCCACTCTCGGAAAACAAACTTGATCGAGAGGCTACAGAACGAGCTATTGACTTCATGTTTGGATGGTTTATGGATCCACTAACAAGAGGAGATTATCCCAAAAGCATGCGTTCCTTGCTTAAATCAAGATTACCAAAGTTTACAAAGGAGCAATCCAGATTGCTTACTAATTCATCTGATTTTATTGGCATAAACTACTATACCGCTAGATATGTCTCTGATGCACCTGAACTAAGAAATCTCAGACACAATTACATGACAGATGTTCTTGCAAATTTTTCATTTGTGCGTGATGGAAAAACTATTGGTCTAAAT 1161 0.3919 MAKNRYYFHVHLHLIALLSSLITVTEALAPTPEITLLNRSSFPPGFIYGTSSSAYQYEGAANGGGRGPSIWDTFTHKYPEKIVDRSNGDVAVDSYHRYKEDVGIMKDMNLDAYRFSISWSRILPNGKLSGGINQEGVDYYNNLINELVANGLEPFVTLFHWDLPQSLEDEYGGFLSSRIAKDFEDYAEVCFKEFGDRVNKWITLNEPMTYSHLGYATGELAPGRCSTWFNLHCNGGDSGIEPYLVSHHQLLAHAAAVNVYKTKYEKMQNGLIGITLNFVWYEPLSENKLDREATERAIDFMFGWFMDPLTRGDYPKSMRSLLKSRLPKFTKEQSRLLTNSSDFIGINYYTARYVSDAPELRNLRHNYMTDVLANFSFVRDGKTIGLN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0571 387 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 46 60 IPR033132 -
Pvu11g0571 387 SUPERFAMILY (Trans)glycosidases 30 384 IPR017853 -
Pvu11g0571 387 PANTHER GLYCOSYL HYDROLASE 10 387 IPR001360 GO:0004553|GO:0005975
Pvu11g0571 387 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 10 387 - -
Pvu11g0571 387 Gene3D Glycosidases 24 386 - -
Pvu11g0571 387 Pfam Glycosyl hydrolase family 1 40 359 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0571 Pvu-Chr11 4744978 4747347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0571 7 385 Glycoside Hydrolase AT5G44640 52.632 1.34e-142 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0571 - K01188 pvu:PHAVU_011G055700g 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0571 11 4744978 4747347 Pvu11g0571 11 4744978 4747347 ECH