Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0553 ATGTCAACTTCGTTGTTCCGCACCATAAGGAGAGCATCCTCTGCTCTCAGATTCTCGTACGCCACCTCGTTTTCGGTCTCTCCCAGGTCAGTTGGGAGGAGCAAGATGTGTGTGTGTTCTCCTTTGAGCCATTGTGTTTCGCTAGGAGAGCAAGGTTATTGGTGGGGTTTAAGAAATTTGAGCCATGGCAGAGTGAACCTTGTGATAACGGGAGGGAAGACCAAGTTTGAGACTCATGAGGTTGAGCCTCCTAAGAAAGACAAGTGGAAGACCAAGAAGAGATTGAAGATGCAGAGGAAGAGAGAGAAGGAGAAGAGGAAAGCGGCCAACAGGAAAGACCCTCGTCGACTTGGTGTCAAAGGGAAGAAGAAGAAGCAGAGATTTGAAAGTGCAGACGAGAGAATTAAGTACAAGATTGAGAACGCCAGAGTTAAGGAAGCATTGCTCATTGAAAGGCTCAAAAGATATGAAGTTCCTAAACTTCAGGGTCCTGTTGTGAAGCCTGATAGCTTGACGGGGGAGGAAAGGTTTTATTTGAAGAAAATGGCTCAGAAGAGATCTAATTATCTACAAATTGGCAGAAGAGGATTGTTTGGAGGGGTTGTGCTCAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAGCCTGGTCAAATACACGAGTATGTGCAAGAACTTACCAGAAAGAGCGGCGGTATTCCACTTCAAATAATTGGAGATGACACTGCAATATTTTATCGTGGAAAGAACTACGAACAGCCTGATATTATGTCACCAATTGATACACTGTCCAAGAAAAAGGCACTTGAAAAATCTAAGTATGAGCAATCACTTGACTCGGTGAGGCGCTTCATTGCTATTGCTGAGAAAGAACTAGAGCTATATTACAGACACGTTGCACTTTATGGTGATCCAAACAACCGAAATCCCTTATCAGTACTGGACAGTCCAGATGGAAACTCCAAGGAAAAAGGGAATCATGGAATTCAAGATAAAAAATTCCCTCACTTGAACAGTGATTATTTTTCAGCTACTCTTTCAGAGACTAAAGCAGATTCCACCGAAATGGAGCTGTCAGAAGCAGAAGATAGTTTTGAAGATGAAAGCCTGTCAATGAATGAATCAGATTCTGAAGAGAACAGCATGTCTGGTTCCAATGGTGATCAAGAAAAGGAGGTGTATTTTACTAAATTGCGATATGAAAGTGTAAGCTCGACCACTGGTTCTTCATCAATGGCTAAACGTAGCCACTATTATAATAATAATAATAAAAATCAATGTATATAA 1311 0.4165 MSTSLFRTIRRASSALRFSYATSFSVSPRSVGRSKMCVCSPLSHCVSLGEQGYWWGLRNLSHGRVNLVITGGKTKFETHEVEPPKKDKWKTKKRLKMQRKREKEKRKAANRKDPRRLGVKGKKKKQRFESADERIKYKIENARVKEALLIERLKRYEVPKLQGPVVKPDSLTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVICKPCKPGQIHEYVQELTRKSGGIPLQIIGDDTAIFYRGKNYEQPDIMSPIDTLSKKKALEKSKYEQSLDSVRRFIAIAEKELELYYRHVALYGDPNNRNPLSVLDSPDGNSKEKGNHGIQDKKFPHLNSDYFSATLSETKADSTEMELSEAEDSFEDESLSMNESDSEENSMSGSNGDQEKEVYFTKLRYESVSSTTGSSSMAKRSHYYNNNNKNQCI* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0553 436 Gene3D - 170 271 IPR035920 -
Pvu11g0553 436 MobiDBLite consensus disorder prediction 366 382 - -
Pvu11g0553 436 MobiDBLite consensus disorder prediction 407 436 - -
Pvu11g0553 436 MobiDBLite consensus disorder prediction 314 343 - -
Pvu11g0553 436 MobiDBLite consensus disorder prediction 383 398 - -
Pvu11g0553 436 Coils Coil 92 112 - -
Pvu11g0553 436 MobiDBLite consensus disorder prediction 89 106 - -
Pvu11g0553 436 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 393 IPR040286 -
Pvu11g0553 436 MobiDBLite consensus disorder prediction 78 126 - -
Pvu11g0553 436 SMART CRS1_YhbY_2 171 255 IPR001890 GO:0003723
Pvu11g0553 436 MobiDBLite consensus disorder prediction 328 342 - -
Pvu11g0553 436 ProSiteProfiles CRM domain profile. 169 266 IPR001890 GO:0003723
Pvu11g0553 436 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 393 - -
Pvu11g0553 436 SUPERFAMILY YhbY-like 170 264 IPR035920 -
Pvu11g0553 436 MobiDBLite consensus disorder prediction 356 436 - -
Pvu11g0553 436 Pfam CRS1 / YhbY (CRM) domain 171 255 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0553 Pvu-Chr11 4574584 4578590 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0553 - - vun:114168415 697.582