Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0550 ATGGGGAAGCCTTTGTTTTATGAGATCTTGGAAAAACCTGCCACAAGTTGTATGATAGGAATATGCAGCATGATTTGGTTCTATATACAGAAGAAAAATATTGGGTATTCACATGTGGGTTTGAGTTATGAGACTGCAGTGGAAGGGCATTATTGGAGGATAATTACTTCTGCTTTTTCTCATATTAGTGTTATTCATCTTGTTTTTAACATGAGTGCATTGTGGAGTCTTGGGGTGATAGAGCAGCTTGGGCACTTGGGCCTTGGTGTTGAGTACTACTTGCAGTACACACTTGTGTTGGTGATTGTATCAGGAGTGCTGGTTCTTGCAATGTATCATATGTTGATTCAGAGATTCAAGCTTGAGTATTTTCGTCGAGTGACAGCTGTTGGCTATTCCTGCGTTGTTTTTGGGTGGATGACAATTCTTTCTGTGAAGCAACCATCTTCCAAGTTGGATCTCTTTGGGTTTCTGTCTCTCCCTATCAGTTTTGCGCCGTTTGAATCGCTTATTTTCACTTCGATCATCGTTCCTCAGGCAAGTTTCATTGGCCATTTGTCAGGGATTGTTGTTGGATATGCTATAGCATGGGGTTTAATTCATGGGATGAGCAATTACTGGGCACTCTCCTTATTGGGATGGATTCTGCTTGTCTTTGTTTTTAGTTTGAAGAGATCTGGAGCGCTTGATCTAAGCTTTCTTGAGATTGAATCTGTTACCGATCCTTCCTTACCTTCTGTGCGGTTTTTGGCATCAAGCACTGGCAGAACACTGCAGATGAGTGCTTTGCCAAATGGGAATGTTGAAATTGTCTAA 816 0.4142 MGKPLFYEILEKPATSCMIGICSMIWFYIQKKNIGYSHVGLSYETAVEGHYWRIITSAFSHISVIHLVFNMSALWSLGVIEQLGHLGLGVEYYLQYTLVLVIVSGVLVLAMYHMLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWILLVFVFSLKRSGALDLSFLEIESVTDPSLPSVRFLASSTGRTLQMSALPNGNVEIV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0550 271 Gene3D - 10 199 IPR035952 -
Pvu11g0550 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
Pvu11g0550 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Pvu11g0550 271 PANTHER RHOMBOID PROTEASE 1 271 - -
Pvu11g0550 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0550 Pvu-Chr11 4554377 4555916 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0550 - - gmx:100818954 518.464